RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NDE1Q9NXR1 346 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 QPCTLQ9NXS2 382 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 SAP30BPQ9UHR5 308 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 DDX19BQ9UMR2 479 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 TAF4O00268 1085 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 STX6O43752 255 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 FESP07332 822 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TMEM11P17152 192 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 WEE1P30291 646 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ETV5P41161 510 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 PLD1Q13393 1074 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 SMUG1Q53HV7 270 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 SNX29Q8TEQ0 813 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 MRPS27Q92552 414 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 STON1Q9Y6Q2 735 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ELP1O95163 1332 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 PAHP00439 452 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 SLCO1A2P46721 670 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 IFNAR2P48551 515 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 FNTAP49354 379 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ART3Q13508 389 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TSTA3Q13630 321 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 LPCAT2Q7L5N7 544 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 JPH3Q8WXH2 748 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 SLC9A6Q92581 669 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TBATAQ96M53 351 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ZSCAN16Q9H4T2 348 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ELAC1Q9H777 363 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 C9orf78Q9NZ63 289 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 HPCAL4Q9UM19 191 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 MAPK8IP1Q9UQF2 711 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ARHGAP10A1A4S6 786 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 NUTM2FA1L443 756 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TXNDC9O14530 226 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 MTSS1O43312 755 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 CCND1P24385 295 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TKTP29401 623 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TFAP4Q01664 338 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ZMYND11Q15326 602 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 STX1AQ16623 288 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD20A4Q4UJ75 823 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD20A1Q5TYW2 823 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TRIM69Q86WT6 500 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 GPR161Q8N6U8 529 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 MINDY2Q8NBR6 621 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 RNASE11Q8TAA1 199 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 FAM149B1Q96BN6 582 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 CARD14Q9BXL6 1004 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 MOV10L1Q9BXT6 1211 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 CYLDQ9NQC7 956 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 COX16Q9P0S2 106 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 FBXO40Q9UH90 709 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 CDH3P22223 829 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 JAK1P23458 1154 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 MRPL12P52815 198 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 PHLDB3Q6NSJ2 640 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 AKAP14Q86UN6 197 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 TBC1D19Q8N5T2 526 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 ZNF579Q8NAF0 562 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 DEPTORQ8TB45 409 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 GAL3ST1Q99999 423 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 GMIPQ9P107 970 aa6.72□□□□□ -1.33
CLCN3-204ENST00000504131 CAB39Q9Y376 341 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 RRBP1Q9P2E9 1410 aaKnown RBP6.72□□□□□ -1.33
CLCN3-204ENST00000504131 K7ELQ4 463 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 ABLIM1O14639 778 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 GFPT2O94808 682 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 ESRRBO95718 433 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 DMC1Q14565 340 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 NR1D2Q14995 579 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 CYP4V2Q6ZWL3 525 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 KDELC2Q7Z4H8 507 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 UBR7Q8N806 425 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 SPERTQ8NA61 448 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 SAV1Q9H4B6 383 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 ZNF287Q9HBT7 754 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 AP3D1O14617 1153 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 SYNCRIPO60506 623 aaKnown RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 SNX4O95219 450 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 IFNA14P01570 189 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 RECQLP46063 649 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 VAC14Q08AM6 782 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 TRPC3Q13507 836 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 PDIA5Q14554 519 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 MVPQ14764 893 aaKnown RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 RAB3GAP1Q15042 981 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 SNAP47Q5SQN1 464 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 KDELC1Q6UW63 502 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 METTL6Q8TCB7 284 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 DIS3LQ8TF46 1054 aaKnown RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 FTOQ9C0B1 505 aaKnown RBP eCLIP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 NEK6Q9HC98 313 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 TRPV5Q9NQA5 729 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 TUBGCP4Q9UGJ1 667 aa6.71□□□□□ -1.33
CLCN3-204ENST00000504131 CORO1CQ9ULV4 474 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-204ENST00000504131 CRTAPO75718 401 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 PRG2P13727 222 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 FGFR2P21802 821 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 PRKAR2BP31323 418 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms