RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RSPH10B2B2RC85 870 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 RSPH10BP0C881 870 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 EIF2AK2P19525 551 aaKnown RBP23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 ITGB3BPQ13352 177 aaPredicted RBP23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 PPP4R3CPQ6ZMV5 832 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 NELFCDQ8IXH7 590 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 RMDN3Q96TC7 470 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 DNAJC7Q99615 494 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 NDST4Q9H3R1 872 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 SNCAIPQ9Y6H5 919 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 TRAF5O00463 557 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 ZBTB39O15060 712 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 ETF1P62495 437 aaKnown RBP23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 ERVK-24P63145 666 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 FIGNQ5HY92 759 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 FKBP15Q5T1M5 1219 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 NSMFQ6X4W1 530 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 SYT17Q9BSW7 474 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 LUC7L2Q9Y383 392 aaKnown RBP23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 COL4A3BPQ9Y5P4 624 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 ADGRG1Q9Y653 693 aa23.63■■□□□ 1.37
UBE2D3-216ENST00000503742 MYPNQ86TC9 1320 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 HOXD13P35453 343 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 MARSP56192 900 aaKnown RBP23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 MAP3K9P80192 1104 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 MTMR1Q13613 665 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 PRKG1Q13976 671 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 TMEM132BQ14DG7 1078 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 BMT2Q1RMZ1 405 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 EDRF1Q3B7T1 1238 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 SNRNP48Q6IEG0 339 aaKnown RBP23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 OR8K1Q8NGG5 319 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 LXNQ9BS40 222 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 DESI2Q9BSY9 194 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 OLFML3Q9NRN5 406 aa23.62■■□□□ 1.37
UBE2D3-216ENST00000503742 TBCAO75347 108 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 GAP43P17677 238 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 KLK7P49862 253 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 BAATQ14032 418 aaPredicted RBP23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 VGLL4Q14135 290 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 DLK2Q6UY11 383 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 CYP26C1Q6V0L0 522 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 SYT10Q6XYQ8 523 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 PTPRFP10586 1907 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 DDX39AO00148 427 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 CCDC175P0C221 793 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 YBX3P16989 372 aaKnown RBP eCLIP23.61■■□□□ 1.374e-8■□□□□ 8.6
UBE2D3-216ENST00000503742 XRRA1Q6P2D8 792 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 MIER3Q7Z3K6 550 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 RBM46Q8TBY0 533 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 PURBQ96QR8 312 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 TBC1D22BQ9NU19 505 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 KCND2Q9NZV8 630 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 PKD2L1Q9P0L9 805 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 TRAF3IP3Q9Y228 551 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 SIK3Q9Y2K2 1263 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 OTOFQ9HC10 1997 aa23.61■■□□□ 1.37
UBE2D3-216ENST00000503742 GNA14O95837 355 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 ARHGEF16Q5VV41 709 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 BANK1Q8NDB2 785 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 DCPSQ96C86 337 aaKnown RBP23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 IQCDQ96DY2 449 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 HOXC10Q9NYD6 342 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 A0A1W2PQJ5 194 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 SPDYE16A6NNV3 312 aaPredicted RBP23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 ADM5C9JUS6 153 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 MYBP10242 640 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 KNOP1Q1ED39 458 aaKnown RBP23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 TEX13BQ9BXU2 312 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 MAF1Q9H063 256 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 BCAS3Q9H6U6 928 aa23.6■■□□□ 1.37
UBE2D3-216ENST00000503742 PHLPP2Q6ZVD8 1323 aa23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 CTIFO43310 598 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 P4HBP07237 508 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 MYCLP12524 364 aaPredicted RBP23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 TRIM21P19474 475 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 ZNF131P52739 623 aa23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 SULF1Q8IWU6 871 aa23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 MRPL44Q9H9J2 332 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 AGPAT5Q9NUQ2 364 aa23.59■■□□□ 1.37
UBE2D3-216ENST00000503742 LOC285556D6RIA3 1793 aa23.58■■□□□ 1.37
UBE2D3-216ENST00000503742 MEA1Q16626 185 aa23.58■■□□□ 1.37
UBE2D3-216ENST00000503742 WDR59Q6PJI9 974 aa23.58■■□□□ 1.37
UBE2D3-216ENST00000503742 VSIG10LQ86VR7 867 aa23.58■■□□□ 1.37
UBE2D3-216ENST00000503742 POLD4Q9HCU8 107 aa23.58■■□□□ 1.37
UBE2D3-216ENST00000503742 PDXKO00764 312 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 PRPF6O94906 941 aaKnown RBP23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 FAM13AO94988 1023 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 ZBED6P86452 979 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 C9orf131Q5VYM1 1079 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 CHP1Q99653 195 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 ZSWIM4Q9H7M6 989 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 ODF2LQ9ULJ1 636 aa23.58■■□□□ 1.36
UBE2D3-216ENST00000503742 FANCGO15287 622 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 LYPLA2O95372 231 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 GUCY2CP25092 1073 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 ADAM9Q13443 819 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 CCDC40Q4G0X9 1142 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 TRIM59Q8IWR1 403 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms