RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 EPC1Q9H2F5 836 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.82■■□□□ 1.56
PCDH1-204ENST00000503492 CETN3O15182 167 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 TBCAO75347 108 aaKnown RBP24.82■■□□□ 1.56
PCDH1-204ENST00000503492 CYP27A1Q02318 531 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 TUBB2AQ13885 445 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 TEX35Q5T0J7 233 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 B3GNT9Q6UX72 402 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 CCDC42Q96M95 316 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 TUBB2BQ9BVA1 445 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 WRAP73Q9P2S5 460 aaPredicted RBP24.82■■□□□ 1.56
PCDH1-204ENST00000503492 TBC1D10BQ4KMP7 808 aaPredicted RBP24.81■■□□□ 1.56
PCDH1-204ENST00000503492 C1orf186Q6ZWK4 172 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 WDR11Q9BZH6 1224 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 EDEM3Q9BZQ6 932 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 MTFR1LQ9H019 292 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 ZNF446Q9NWS9 450 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 DDX41Q9UJV9 622 aaKnown RBP24.81■■□□□ 1.56
PCDH1-204ENST00000503492 RPTORQ8N122 1335 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 SFI1A8K8P3 1242 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 CTNND1O60716 968 aaKnown RBP24.81■■□□□ 1.56
PCDH1-204ENST00000503492 NOL4O94818 638 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 IPO7O95373 1038 aaKnown RBP24.81■■□□□ 1.56
PCDH1-204ENST00000503492 ITGB5P18084 799 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 BMT2Q1RMZ1 405 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 PDXDC1Q6P996 788 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 SRGAP1Q7Z6B7 1085 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 CPXCR1Q8N123 301 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 HACL1Q9UJ83 578 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 BCS1LQ9Y276 419 aa24.81■■□□□ 1.56
PCDH1-204ENST00000503492 IPO5O00410 1097 aaKnown RBP24.8■■□□□ 1.56
PCDH1-204ENST00000503492 CLCN6P51797 869 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 CBX1P83916 185 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 KRT26Q7Z3Y9 468 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 TEKT3Q9BXF9 490 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 RAVER2Q9HCJ3 691 aaKnown RBP24.8■■□□□ 1.56
PCDH1-204ENST00000503492 PDXKO00764 312 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 KRT86O43790 486 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 TFRCP02786 760 aaKnown RBP24.8■■□□□ 1.56
PCDH1-204ENST00000503492 AMPD2Q01433 879 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 RASSF7Q02833 373 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 EPHA7Q15375 998 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 GPIHBP1Q8IV16 184 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 IL31RAQ8NI17 732 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 GOLGA1Q92805 767 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 ZSWIM4Q9H7M6 989 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 PUF60Q9UHX1 559 aaKnown RBP24.8■■□□□ 1.56
PCDH1-204ENST00000503492 CNOT7Q9UIV1 285 aaKnown RBP24.8■■□□□ 1.56
PCDH1-204ENST00000503492 FAM184BQ9ULE4 1060 aa24.8■■□□□ 1.56
PCDH1-204ENST00000503492 GCNT3O95395 438 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 EIF4A3P38919 411 aaKnown RBP24.79■■□□□ 1.56
PCDH1-204ENST00000503492 CACNA2D4Q7Z3S7 1137 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 LSM14BQ9BX40 385 aaKnown RBP24.79■■□□□ 1.56
PCDH1-204ENST00000503492 SLC38A10Q9HBR0 1119 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 OLFML3Q9NRN5 406 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 GINM1Q9NU53 330 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 GJA3Q9Y6H8 435 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 ALAS1P13196 640 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 GAP43P17677 238 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 MUTP22033 750 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 VAV2P52735 878 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 NBPF12Q5TAG4 269 aaPredicted RBP24.79■■□□□ 1.56
PCDH1-204ENST00000503492 GPR161Q8N6U8 529 aaKnown RBP24.79■■□□□ 1.56
PCDH1-204ENST00000503492 CEP112Q8N8E3 955 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 CRACR2AQ9BSW2 395 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 CEP72Q9P209 647 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 ASTN1O14525 1302 aa24.79■■□□□ 1.56
PCDH1-204ENST00000503492 CALUO43852 315 aaPredicted RBP24.78■■□□□ 1.56
PCDH1-204ENST00000503492 KIF11P52732 1056 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 CHMP4BP1P59074 171 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 GHRHRQ02643 423 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 KCNA1Q09470 495 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 MUM1L1Q5H9M0 696 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 RABGGTAQ92696 567 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 RIT2Q99578 217 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 NLRC4Q9NPP4 1024 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 DUSP10Q9Y6W6 482 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 FAM13AO94988 1023 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 MTMR2Q13614 643 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 ARHGAP27Q6ZUM4 889 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 MCF2L2Q86YR7 1114 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 NACC1Q96RE7 527 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 TYW1Q9NV66 732 aaKnown RBP24.78■■□□□ 1.56
PCDH1-204ENST00000503492 OGFRQ9NZT2 677 aa24.78■■□□□ 1.56
PCDH1-204ENST00000503492 FLOT1O75955 427 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 ZSCAN20P17040 1043 aaPredicted RBP24.77■■□□□ 1.56
PCDH1-204ENST00000503492 VCAM1P19320 739 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 APBA1Q02410 837 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 KCNH2Q12809 1159 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 SPA17Q15506 151 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 FRMD5Q7Z6J6 570 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 PURBQ96QR8 312 aaKnown RBP24.77■■□□□ 1.56
PCDH1-204ENST00000503492 KCNH7Q9NS40 1196 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 FRMPD4Q14CM0 1322 aa24.77■■□□□ 1.56
PCDH1-204ENST00000503492 DDX39AO00148 427 aaKnown RBP24.76■■□□□ 1.55
PCDH1-204ENST00000503492 LCA5LO95447 670 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 BCRP11274 1271 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 MYCT1Q8N699 235 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 LXNQ9BS40 222 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 HOMER2Q9NSB8 354 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms