RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 RTP3Q9BQQ7 232 aa8.92□□□□□ -0.98
PDE4D-210ENST00000503258 RNPEPQ9H4A4 650 aa8.92□□□□□ -0.98
PDE4D-210ENST00000503258 PRR23AA6NEV1 266 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 RAD21O60216 631 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 CALM1P0DP23 149 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 CALM2P0DP24 149 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 CALM3P0DP25 149 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SLC16A2P36021 539 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 RRP1P56182 461 aaKnown RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SP2Q02086 613 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 LINC01465Q8N7H1 131 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 LINC01599Q8WXQ3 324 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 MRPS27Q92552 414 aaKnown RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SEC62Q99442 399 aaKnown RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 JADE2Q9NQC1 790 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 TMEM161AQ9NX61 479 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SORCS3Q9UPU3 1222 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 GRM6O15303 877 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 TREHO43280 583 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 PPP1R11O60927 126 aaPredicted RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 GLP2RO95838 553 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 ITGB1P05556 798 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 MRPS9P82933 396 aaKnown RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 IMMTQ16891 758 aaKnown RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 HSDL1Q3SXM5 330 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 MLXIPQ9HAP2 919 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 CLDND1Q9NY35 253 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 USP15Q9Y4E8 981 aaPredicted RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 MRPL42Q9Y6G3 142 aaKnown RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SKIP12755 728 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SDSP20132 328 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 MAMSTRQ6ZN01 415 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 PPFIBP1Q86W92 1011 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 CCDC105Q8IYK2 499 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 TMEM117Q9H0C3 514 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 ADAM7Q9H2U9 754 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 PCDHB12Q9Y5F1 795 aa8.91□□□□□ -0.98
PDE4D-210ENST00000503258 ZFP37Q9Y6Q3 630 aaPredicted RBP8.91□□□□□ -0.98
PDE4D-210ENST00000503258 SMARCA5O60264 1052 aaPredicted RBP8.9□□□□□ -0.98
PDE4D-210ENST00000503258 EOMESO95936 686 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 FOSP01100 380 aaPredicted RBP8.9□□□□□ -0.98
PDE4D-210ENST00000503258 CYP3A4P08684 503 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 ASTLQ6HA08 431 aaPredicted RBP8.9□□□□□ -0.98
PDE4D-210ENST00000503258 PHLDB3Q6NSJ2 640 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 COLGALT1Q8NBJ5 622 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 ALG1Q9BT22 464 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 TLR9Q9NR96 1032 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 CHST12Q9NRB3 414 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 COL4A2P08572 1712 aa8.9□□□□□ -0.98
PDE4D-210ENST00000503258 A0A0D9SFI3 127 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 GSTTP1A0A1W2PQM5 241 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 C9IYK1 514 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 ZNF286BP0CG31 522 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 SCG2P13521 617 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 PCBP1Q15365 356 aaKnown RBP eCLIP8.9□□□□□ -0.99
PDE4D-210ENST00000503258 GRIK4Q16099 956 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 VPS53Q5VIR6 699 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 MRPL9Q9BYD2 267 aaKnown RBP8.9□□□□□ -0.99
PDE4D-210ENST00000503258 CELF4Q9BZC1 486 aaKnown RBP8.9□□□□□ -0.99
PDE4D-210ENST00000503258 OSBPL6Q9BZF3 934 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 CWH43Q9H720 699 aa8.9□□□□□ -0.99
PDE4D-210ENST00000503258 MKI67P46013 3256 aaKnown RBP8.9□□□□□ -0.99
PDE4D-210ENST00000503258 GPR182O15218 404 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 NMIQ13287 307 aaPredicted RBP8.89□□□□□ -0.99
PDE4D-210ENST00000503258 RDM1Q8NG50 284 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 PBXIP1Q96AQ6 731 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 CERS4Q9HA82 394 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 SSX2IPQ9Y2D8 614 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 PCDHA1Q9Y5I3 950 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
PDE4D-210ENST00000503258 KLRF2D3W0D1 207 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 EFEMP2O95967 443 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 CRYBB1P53674 252 aaPredicted RBP8.89□□□□□ -0.99
PDE4D-210ENST00000503258 SNAP25P60880 206 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 TROAPQ12815 778 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 AP3B2Q13367 1082 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 BTG3Q14201 252 aaPredicted RBP8.89□□□□□ -0.99
PDE4D-210ENST00000503258 SLC22A17Q8WUG5 538 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 CUL5Q93034 780 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 MUTYHQ9UIF7 546 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 KAT6AQ92794 2004 aa8.89□□□□□ -0.99
PDE4D-210ENST00000503258 HBP1O60381 514 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 GFRA3O60609 400 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 KIF5BP33176 963 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 PPFIA1Q13136 1202 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 MTMR3Q13615 1198 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 SMC1AQ14683 1233 aaKnown RBP8.88□□□□□ -0.99
PDE4D-210ENST00000503258 SLC24A5Q71RS6 500 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 SPRED2Q7Z698 418 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 MYOCDQ8IZQ8 938 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 VN1R2Q8NFZ6 395 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 ZSWIM5Q9P217 1185 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 CDY2AQ9Y6F7 541 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 BRCA2P51587 3418 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 ESYT2A0FGR8 921 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 M0QZ92 97 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 NOP56O00567 594 aaKnown RBP8.88□□□□□ -0.99
PDE4D-210ENST00000503258 MAGEB2O15479 319 aa8.88□□□□□ -0.99
PDE4D-210ENST00000503258 EIF2AK2P19525 551 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms