RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 FANCGO15287 622 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 KRT18P05783 430 aaKnown RBP12.8□□□□□ -0.36
USP46-204ENST00000503060 PSMC6P62333 389 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 ZCWPW2Q504Y3 356 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 OR8K1Q8NGG5 319 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 ERGIC2Q96RQ1 377 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 POLR3CQ9BUI4 534 aaPredicted RBP12.8□□□□□ -0.36
USP46-204ENST00000503060 NUP58Q9BVL2 599 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
USP46-204ENST00000503060 GINM1Q9NU53 330 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 MEIS1O00470 390 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 NKRFO15226 690 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP46-204ENST00000503060 GNG11P61952 73 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 RASSF7Q02833 373 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 HERC4Q5GLZ8 1057 aaPredicted RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 FKBP15Q5T1M5 1219 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 SAMD7Q7Z3H4 446 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 MTERF4Q7Z6M4 381 aaKnown RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 SYT2Q8N9I0 419 aaPredicted RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 DNAJC7Q99615 494 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 FGFBP2Q9BYJ0 223 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 TTYH3Q9C0H2 523 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 DEFB129Q9H1M3 183 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 TBC1D7Q9P0N9 293 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 ASTN2O75129 1339 aaPredicted RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 RASSF10A6NK89 507 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 EML1O00423 815 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 COQ9O75208 318 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 ICAM1P05362 532 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 UBXN2AP68543 259 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP46-204ENST00000503060 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 LPAR1Q92633 364 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 SLC5A5Q92911 643 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 SENP7Q9BQF6 1050 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 KIAA1683Q9H0B3 1180 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 CNOT7Q9UIV1 285 aaKnown RBP12.79□□□□□ -0.36
USP46-204ENST00000503060 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
USP46-204ENST00000503060 ZNF536O15090 1300 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 FZD9O00144 591 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
USP46-204ENST00000503060 PSMD10O75832 226 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 KLK7P49862 253 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 PRELPP51888 382 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 NAA30Q147X3 362 aaPredicted RBP12.78□□□□□ -0.36
USP46-204ENST00000503060 LRCH2Q5VUJ6 765 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 TTC30BQ8N4P2 665 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
USP46-204ENST00000503060 ACRBPQ8NEB7 543 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 WDR24Q96S15 920 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 CASQ1P31415 396 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 CYP4A11Q02928 519 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 GIT2Q14161 759 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 CEP55Q53EZ4 464 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 FIGNQ5HY92 759 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 OTOP1Q7RTM1 612 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 PCMTD1Q96MG8 357 aaPredicted RBP12.78□□□□□ -0.36
USP46-204ENST00000503060 CHP1Q99653 195 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
USP46-204ENST00000503060 EYA4O95677 639 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 TRIM21P19474 475 aaKnown RBP12.77□□□□□ -0.37
USP46-204ENST00000503060 HSD17B4P51659 736 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 FKBP3Q00688 224 aaKnown RBP12.77□□□□□ -0.37
USP46-204ENST00000503060 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
USP46-204ENST00000503060 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP46-204ENST00000503060 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 HOOK2Q96ED9 719 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.37
USP46-204ENST00000503060 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 RGL1Q9NZL6 768 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 A0A0U1RQJ8 604 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 TRAF5O00463 557 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.37
USP46-204ENST00000503060 ZBED6P86452 979 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 WDR59Q6PJI9 974 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 SLC30A10Q6XR72 485 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 NELFCDQ8IXH7 590 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 ATRIPQ8WXE1 791 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 IQCDQ96DY2 449 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 REEP2Q9BRK0 252 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms