RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SDHAP31040 664 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 HOXA10P31260 410 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 GJA4P35212 333 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 FNTBP49356 437 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 MVKQ03426 396 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 SEC23AQ15436 765 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 SLC14A2Q15849 920 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 RALGPS1Q5JS13 557 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 AIFM3Q96NN9 605 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 ALPK1Q96QP1 1244 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 ORAI2Q96SN7 254 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 CCM2LQ9NUG4 571 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 SLAMF8Q9P0V8 285 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 TMEM59LQ9UK28 342 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 ACSL6Q9UKU0 697 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 INVSQ9Y283 1065 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 TAF6LQ9Y6J9 622 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 HGSO14964 777 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 BUB1BO60566 1050 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 MSL3P1P0C860 447 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 LPOP22079 712 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 TACR1P25103 407 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 CD96P40200 585 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 SLC6A11P48066 632 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 HTRA3P83110 453 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 CHRNEQ04844 493 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 ZP2Q05996 745 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 BNIP3Q12983 259 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 OS9Q13438 667 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 ACAP2Q15057 778 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 EPHA7Q15375 998 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 SYCP2LQ5T4T6 812 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 BTBD8Q5XKL5 378 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 EPM2AIP1Q7L775 607 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 CABP7Q86V35 215 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 STK11IPQ8N1F8 1099 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 PHOSPHO1Q8TCT1 267 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 RTF1Q92541 710 aaKnown RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 C16orf92Q96LL3 132 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 ZNF700Q9H0M5 742 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 USP36Q9P275 1121 aaKnown RBP6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 MSRAQ9UJ68 235 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 RCAN3Q9UKA8 241 aa6.86□□□□□ -1.31
HMGB1P3-201ENST00000502802 A0A1W2PQJ5 194 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 FAM90A27PA6NNH2 459 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 ERC2O15083 957 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 NRDCO43847 1150 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 C4BPAP04003 597 aaKnown RBP6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 ITGB2P05107 769 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 PRKCAP17252 672 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 PTPN1P18031 435 aaKnown RBP6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 ADCY1Q08828 1119 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 TUSC3Q13454 348 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 PLA2G4EQ3MJ16 856 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 NKAPLQ5M9Q1 402 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 NME9Q86XW9 330 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 RBM12BQ8IXT5 1001 aaKnown RBP6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 TGFBRAP1Q8WUH2 860 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 SEC14L1Q92503 715 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 ZNF496Q96IT1 587 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 TEKT5Q96M29 485 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 CHST12Q9NRB3 414 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 RIC8BQ9NVN3 520 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 ASH2LQ9UBL3 628 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 TELO2Q9Y4R8 837 aa6.85□□□□□ -1.31
HMGB1P3-201ENST00000502802 ZRANB2O95218 330 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 RASSF7Q02833 373 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 KCNMA1Q12791 1236 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 FSCN1Q16658 493 aaKnown RBP6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 MSMPQ1L6U9 139 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 CATSPEREQ5SY80 951 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 DCP2Q8IU60 420 aaKnown RBP6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 TRIM48Q8IWZ4 208 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 OXR1Q8N573 874 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 SAMD3Q8N6K7 520 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 PDZD8Q8NEN9 1154 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 BCL7CQ8WUZ0 217 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 SSH1Q8WYL5 1049 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 JADE3Q92613 823 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 SLC39A13Q96H72 371 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 LRGUKQ96M69 825 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 SPOCK3Q9BQ16 436 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 PLCD4Q9BRC7 762 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 PDGFDQ9GZP0 370 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 ANLNQ9NQW6 1124 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 BSDC1Q9NW68 430 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 DNAJC28Q9NX36 388 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 MYOTQ9UBF9 498 aa6.84□□□□□ -1.31
HMGB1P3-201ENST00000502802 PRAMEF25A6NGN4 478 aa6.83□□□□□ -1.32
HMGB1P3-201ENST00000502802 FOXP2O15409 715 aa6.83□□□□□ -1.32
HMGB1P3-201ENST00000502802 TGFB1P01137 390 aa6.83□□□□□ -1.32
HMGB1P3-201ENST00000502802 TMEM253P0C7T8 217 aa6.83□□□□□ -1.32
HMGB1P3-201ENST00000502802 GLI4P10075 376 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms