RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RRAGAQ7L523 313 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 NKX2-3Q8TAU0 364 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 ZSWIM4Q9H7M6 989 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 OLFML3Q9NRN5 406 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 FBXL5Q9UKA1 691 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 SHTN1A0MZ66 631 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 WTIPA6NIX2 430 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-203ENST00000502773 CFBP00751 764 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 LMNB1P20700 586 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 CDC25AP30304 524 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 SLC16A2P36021 539 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 STAT1P42224 750 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 STK4Q13043 487 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 UBE2SQ16763 222 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 CROCCP2Q86T23 111 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TMEM139Q8IV31 216 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 CERS5Q8N5B7 392 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 INTS13Q9NVM9 706 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TRAF3IP3Q9Y228 551 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 GRID2IPA4D2P6 1211 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 EXOC3L4Q17RC7 722 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 SPDYE2Q495Y8 402 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 CEP55Q53EZ4 464 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 MIER3Q7Z3K6 550 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 SLC35F6Q8N357 371 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 MYCT1Q8N699 235 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 ZNF577Q9BSK1 485 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 TDRD3Q9H7E2 651 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 DDX4Q9NQI0 724 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 NR2F2P24468 414 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 FXR1P51114 621 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 KRT76Q01546 638 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 GRIK5Q16478 980 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 GNPTABQ3T906 1256 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 TCERG1LQ5VWI1 586 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PBKQ96KB5 322 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 RUNDC3BQ96NL0 473 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 VIPAS39Q9H9C1 493 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 C17orf75Q9HAS0 396 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 BLOC1S4Q9NUP1 217 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 ZBTB21Q9ULJ3 1066 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PCDHA13Q9Y5I0 950 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PPP2R3BQ9Y5P8 575 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 C19orf81C9J6K1 198 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 CTNND1O60716 968 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 KIAA0754O94854 1291 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 GCNT3O95395 438 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 P4HBP07237 508 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 H2AFXP16104 143 aaPredicted RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 GBP1P32455 592 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 COPB2P35606 906 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 HNRNPH2P55795 449 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 AOC3Q16853 763 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PDXDC1Q6P996 788 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 SMIM5Q71RC9 77 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PNMA5Q96PV4 448 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 ACCSQ96QU6 501 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 FAM107BQ9H098 131 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 SLC24A3Q9HC58 644 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 LCMT1Q9UIC8 334 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 MYH1P12882 1939 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 POTEMA6NI47 508 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 CETN2P41208 172 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 ENPEPQ07075 957 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PPP2R5CQ13362 524 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 BMT2Q1RMZ1 405 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 USH1GQ495M9 461 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 APOBEC3FQ8IUX4 373 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 IFT20Q8IY31 132 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 DUSP9Q99956 384 aaKnown RBP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 DESI2Q9BSY9 194 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDGFC-203ENST00000502773 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 CCPG1Q9ULG6 757 aa8.11□□□□□ -1.11
PDGFC-203ENST00000502773 PP2D1A8MPX8 630 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 CES2O00748 559 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 KIF11P52732 1056 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 OAZ1P54368 228 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 PAPD7Q5XG87 772 aaKnown RBP8.1□□□□□ -1.11
PDGFC-203ENST00000502773 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 RAD9BQ6WBX8 426 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 APTXQ7Z2E3 356 aaKnown RBP8.1□□□□□ -1.11
PDGFC-203ENST00000502773 MORC4Q8TE76 937 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 KIFAP3Q92845 792 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 LSM14BQ9BX40 385 aaKnown RBP8.1□□□□□ -1.11
PDGFC-203ENST00000502773 KIAA1586Q9HCI6 787 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 UBR3Q6ZT12 1888 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 GOLGA6L10A6NI86 522 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 TCP10L2B9ZVM9 353 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 SUPT20HL1Q3ZLR7 823 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 CCDC174Q6PII3 467 aa8.1□□□□□ -1.11
PDGFC-203ENST00000502773 INTS8Q75QN2 995 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms