RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 NLRP14Q86W24 1093 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 RAB11FIP4Q86YS3 637 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 CCDC170Q8IYT3 715 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 SMCR8Q8TEV9 937 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 KCTD13Q8WZ19 329 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ZSCAN10Q96SZ4 725 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 FSD1Q9BTV5 496 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ZC3H12CQ9C0D7 883 aaKnown RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 ORC3Q9UBD5 711 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 GPRASP1Q5JY77 1395 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 POM121BA6NF01 834 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 FOXN3O00409 490 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 KIF5CO60282 957 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 EFCAB14O75071 495 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 MYCLP12524 364 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 HADHAP40939 763 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 PRPHP41219 470 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 PHKA2P46019 1235 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 RBM5P52756 815 aaKnown RBP eCLIP4.23□□□□□ -1.73
SUB1-202ENST00000502453 TPD52P55327 224 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 UBXN1Q04323 297 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 MBTPS1Q14703 1052 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ARSJQ5FYB0 599 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 PPP1R26Q5T8A7 1209 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 TCP11L2Q8N4U5 519 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 RUFY2Q8WXA3 655 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 XAGE2Q96GT9 111 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 DISC1Q9NRI5 854 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ABCF3Q9NUQ8 709 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ZHX1Q9UKY1 873 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 SAMM50Q9Y512 469 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 KIF16BQ96L93 1317 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 SASH3O75995 380 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 SRGAP2CP0DJJ0 459 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 NEFHP12036 1026 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 CAPN2P17655 700 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 PLCG1P19174 1290 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 VEGFBP49765 207 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ITGA8P53708 1063 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 CLNS1AP54105 237 aaKnown RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 DCAF7P61962 342 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 DSG1Q02413 1049 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 DMTNQ08495 405 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 PDE3AQ14432 1141 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 LILRB1Q8NHL6 650 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 STK35Q8TDR2 534 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ERCC4Q92889 916 aaPredicted RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 SLC5A5Q92911 643 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 BRF1Q92994 677 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 ADD3Q9UEY8 706 aaKnown RBP4.23□□□□□ -1.73
SUB1-202ENST00000502453 DNAJA2O60884 412 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ULK1O75385 1050 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ZBTB48P10074 688 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 CDC16Q13042 620 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 SHROOM1Q2M3G4 852 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 TJAP1Q5JTD0 557 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 LMBR1LQ6UX01 489 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 TTLL7Q6ZT98 887 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 SDCCAG8Q86SQ7 713 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 MTDHQ86UE4 582 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 NLRP13Q86W25 1043 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 RIN2Q8WYP3 895 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 RUBCNQ92622 972 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 NLRP3Q96P20 1036 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ADPGKQ9BRR6 497 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 CCDC68Q9H2F9 335 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ACAD9Q9H845 621 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 CABP5Q9NP86 173 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 PPARGC1AQ9UBK2 798 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 TBC1D29Q9UFV1 150 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 PCDHA11Q9Y5I1 949 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 TRIM38O00635 465 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 MGEA5O60502 916 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 KRT37O76014 449 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 NME1P15531 152 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 HOXA10P31260 410 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 KIF23Q02241 960 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 MECOMQ03112 1051 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 PPARDQ03181 441 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 LRMPQ12912 555 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 PLS1Q14651 629 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 HIF1AQ16665 826 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 CCDC157Q569K6 752 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 DNTTIP2Q5QJE6 756 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 ATAT1Q5SQI0 421 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ARMC4Q5T2S8 1044 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 KLHDC7AQ5VTJ3 777 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 IZUMO3Q5VZ72 239 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 MAP1SQ66K74 1059 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 NPNTQ6UXI9 565 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 GSTCDQ8NEC7 633 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 GSDMBQ8TAX9 411 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 JADE3Q92613 823 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 PTPRN2Q92932 1015 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 HPS3Q969F9 1004 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 RILPL2Q969X0 211 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 GAL3ST3Q96A11 431 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 CNDP2Q96KP4 475 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms