RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PIP5K1CO60331 668 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 NBNO60934 754 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 HALP42357 657 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 LLGL1Q15334 1064 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 FIGNQ5HY92 759 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 TOR2AQ5JU69 321 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 CPZQ66K79 652 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 FAM20CQ8IXL6 584 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 CPXCR1Q8N123 301 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 Q8N1Y9 231 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
SNX13-212ENST00000498463 ADGRE2Q9UHX3 823 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 MSRAQ9UJ68 235 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 SRPK3Q9UPE1 567 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 NPHS1O60500 1241 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 NDUFS2O75306 463 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 CYP17A1P05093 508 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 TMEM253P0C7T8 217 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 ENDOUP21128 410 aaKnown RBP10.24□□□□□ -0.77
SNX13-212ENST00000498463 FPR2P25090 351 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 NOS3P29474 1203 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 FXR1P51114 621 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNX13-212ENST00000498463 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
SNX13-212ENST00000498463 CCDC149Q6ZUS6 474 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 CEP68Q76N32 757 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 SKAP1Q86WV1 359 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 PAF1Q8N7H5 531 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 PPP1R35Q8TAP8 253 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 SH3RF2Q8TEC5 729 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 RTF1Q92541 710 aaKnown RBP10.24□□□□□ -0.77
SNX13-212ENST00000498463 DLG3Q92796 817 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
SNX13-212ENST00000498463 QRSL1Q9H0R6 528 aaKnown RBP10.24□□□□□ -0.77
SNX13-212ENST00000498463 SERPINB13Q9UIV8 391 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 TUBD1Q9UJT1 453 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 LZTS1Q9Y250 596 aa10.24□□□□□ -0.77
SNX13-212ENST00000498463 WASH4PA8MWX3 477 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 FAM227AF5H4B4 570 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 TM4SF4P48230 202 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 RNF111Q6ZNA4 994 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 OTOP3Q7RTS5 596 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 CXorf67Q86X51 503 aaPredicted RBP10.23□□□□□ -0.77
SNX13-212ENST00000498463 SMAP1Q8IYB5 467 aaPredicted RBP10.23□□□□□ -0.77
SNX13-212ENST00000498463 ARMC10Q8N2F6 343 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 SENP7Q9BQF6 1050 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 KCNF1Q9H3M0 494 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 SMOC1Q9H4F8 434 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 EPB41L1Q9H4G0 881 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 FNIP2Q9P278 1114 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 ANAPC4Q9UJX5 808 aa10.23□□□□□ -0.77
SNX13-212ENST00000498463 TMEM82A0PJX8 343 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 PQBP1O60828 265 aaKnown RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 ZKSCAN1P17029 563 aaPredicted RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 IREB2P48200 963 aaKnown RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 KIF23Q02241 960 aaPredicted RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 MOGSQ13724 837 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 SEC23AQ15436 765 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 CC2D1AQ6P1N0 951 aaPredicted RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 EP400NLQ6ZTU2 488 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 NME8Q8N427 588 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 CAMKK1Q8N5S9 505 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 WFDC12Q8WWY7 111 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 GATA6Q92908 595 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 MVB12AQ96EY5 273 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 TRMT2BQ96GJ1 504 aaKnown RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 SLC2A13Q96QE2 648 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 TMEM60Q9H2L4 133 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 RSAD1Q9HA92 442 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 NGRNQ9NPE2 291 aaKnown RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 USP36Q9P275 1121 aaKnown RBP10.22□□□□□ -0.77
SNX13-212ENST00000498463 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
SNX13-212ENST00000498463 H3BML4 177 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 TUSC2O75896 110 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 TYRP1P17643 537 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 PPM1FP49593 454 aaPredicted RBP10.21□□□□□ -0.77
SNX13-212ENST00000498463 FAM193AP78312 1265 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 GAB4Q2WGN9 574 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 UAP1L1Q3KQV9 507 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 OGFOD3Q6PK18 319 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 ZPBP2Q6X784 338 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 Q6ZNB5 142 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 USP45Q70EL2 814 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 KCNK18Q7Z418 384 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 DENND1CQ8IV53 801 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 TEX2Q8IWB9 1127 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 CD244Q9BZW8 370 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 ERVK13-1Q9NX77 482 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 EDARQ9UNE0 448 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 PPP2R3BQ9Y5P8 575 aa10.21□□□□□ -0.77
SNX13-212ENST00000498463 MORC2Q9Y6X9 1032 aaPredicted RBP10.21□□□□□ -0.77
SNX13-212ENST00000498463 F5H423 210 aaPredicted RBP10.2□□□□□ -0.78
SNX13-212ENST00000498463 PIK3R2O00459 728 aa10.2□□□□□ -0.78
SNX13-212ENST00000498463 CLASP2O75122 1294 aaKnown RBP10.2□□□□□ -0.78
SNX13-212ENST00000498463 CLEC2LP0C7M8 214 aa10.2□□□□□ -0.78
SNX13-212ENST00000498463 LMOD3Q0VAK6 560 aa10.2□□□□□ -0.78
SNX13-212ENST00000498463 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
SNX13-212ENST00000498463 EPHA7Q15375 998 aa10.2□□□□□ -0.78
SNX13-212ENST00000498463 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNX13-212ENST00000498463 KIAA0753Q2KHM9 967 aa10.2□□□□□ -0.78
SNX13-212ENST00000498463 CT83Q5H943 113 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms