RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 PDLIM2Q96JY6 352 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 MTRQ99707 1265 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 LXNQ9BS40 222 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 BHMT2Q9H2M3 363 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 LARSQ9P2J5 1176 aaKnown RBP9.39□□□□□ -0.91
SF3A1-210ENST00000498259 NFE2L3Q9Y4A8 694 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 TLL2Q9Y6L7 1015 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 PARP14Q460N5 1801 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 PASKQ96RG2 1323 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 DNAJC25-GNG10A0A024R161 153 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 MYMKA6NI61 221 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 E9PMD0 336 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 H0YCG3 227 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 EML1O00423 815 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 NOP56O00567 594 aaKnown RBP9.38□□□□□ -0.91
SF3A1-210ENST00000498259 FAM13AO94988 1023 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 SLC10A3P09131 477 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 HOXC6P09630 235 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 CYP11B2P19099 503 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 GUCY2CP25092 1073 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 PRCPP42785 496 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 SLC26A2P50443 739 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
SF3A1-210ENST00000498259 CTTNQ14247 550 aaKnown RBP9.38□□□□□ -0.91
SF3A1-210ENST00000498259 TTLL4Q14679 1199 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 TAF1CQ15572 869 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-210ENST00000498259 Q3C1V9 767 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 FAM26FQ5R3K3 315 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 SEPT14Q6ZU15 432 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 PLEKHH3Q7Z736 793 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 RASAL3Q86YV0 1011 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 MYOCDQ8IZQ8 938 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 SCFD2Q8WU76 684 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 NELFBQ8WX92 580 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 GJA10Q969M2 543 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 NUDT12Q9BQG2 462 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 THAP9Q9H5L6 903 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 AZI2Q9H6S1 392 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 MLXIPQ9HAP2 919 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 C17orf75Q9HAS0 396 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 TXNRD2Q9NNW7 524 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 NRBP2Q9NSY0 501 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 IMPACTQ9P2X3 320 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 PTPRFP10586 1907 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 RLFQ13129 1914 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 UTRNP46939 3433 aa9.38□□□□□ -0.91
SF3A1-210ENST00000498259 A0A0G2JMZ2 1700 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 SLC15A5A6NIM6 579 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 DDX39AO00148 427 aaKnown RBP9.37□□□□□ -0.91
SF3A1-210ENST00000498259 BACH1O14867 736 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 KLRC4O43908 158 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 GNA14O95837 355 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 TPM1P09493 284 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 KCNA2P16389 499 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 BMP6P22004 513 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 CCNE1P24864 410 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 RPL13P26373 211 aaKnown RBP9.37□□□□□ -0.91
SF3A1-210ENST00000498259 EEF1GP26641 437 aaKnown RBP9.37□□□□□ -0.91
SF3A1-210ENST00000498259 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
SF3A1-210ENST00000498259 ZNF75DP51815 510 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 SMTNP53814 917 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 UBASH3AP57075 661 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 GSDMDP57764 484 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 CNTN2Q02246 1040 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 NOGQ13253 232 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 ITGB3BPQ13352 177 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-210ENST00000498259 METTL7BQ6UX53 244 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 IFNL1Q8IU54 200 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 FAM43AQ8N2R8 423 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 MCPH1Q8NEM0 835 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 GOLGA5Q8TBA6 731 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 SOCS4Q8WXH5 440 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 SEPT1Q8WYJ6 367 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 P2RX5Q93086 422 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 FAM167AQ96KS9 214 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 JPH2Q9BR39 696 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-210ENST00000498259 PARVGQ9HBI0 331 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 OLFML3Q9NRN5 406 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 FANCLQ9NW38 375 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 RGL1Q9NZL6 768 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 CTNND2Q9UQB3 1225 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 PCDHB13Q9Y5F0 798 aa9.37□□□□□ -0.91
SF3A1-210ENST00000498259 UBE4BO95155 1302 aa9.36□□□□□ -0.91
SF3A1-210ENST00000498259 FRMD3A2A2Y4 597 aa9.36□□□□□ -0.91
SF3A1-210ENST00000498259 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
SF3A1-210ENST00000498259 NKRFO15226 690 aaKnown RBP eCLIP9.36□□□□□ -0.91
SF3A1-210ENST00000498259 CALUO43852 315 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-210ENST00000498259 TLR2O60603 784 aa9.36□□□□□ -0.91
SF3A1-210ENST00000498259 ATP9AO75110 1047 aa9.36□□□□□ -0.91
SF3A1-210ENST00000498259 DGAT1O75907 488 aa9.36□□□□□ -0.91
SF3A1-210ENST00000498259 SUPT20HL2P0C7V6 817 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms