RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ZNF513Q8N8E2 541 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 SEMA6BQ9H3T3 888 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 TMEM165Q9HC07 324 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 RNF14Q9UBS8 474 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 PLEKHG1Q9ULL1 1385 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 CFAP73A6NFT4 308 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 STXBP3O00186 592 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 RASGRF2O14827 1237 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 SLC5A1P13866 664 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 PRLRP16471 622 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 NAPAP54920 295 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 NCALDP61601 193 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 PURBQ96QR8 312 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 TRIM9Q9C026 710 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 MST1RQ04912 1400 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 PRPF3O43395 683 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 PHKG2P15735 406 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 PDE6CP51160 858 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 EVX2Q03828 476 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 TRIP13Q15645 432 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 GRIPAP1Q4V328 841 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 NAALADL2Q58DX5 795 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 LRIG3Q6UXM1 1119 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 ANKS1AQ92625 1134 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 INPP4AQ96PE3 977 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 TTYH3Q9C0H2 523 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 FAM205AQ6ZU69 1335 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 IRS4O14654 1257 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 UQCRFS1P1P0C7P4 283 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 TARSP26639 723 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ABL2P42684 1182 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 RAB27AP51159 221 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 PMS2P54278 862 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ALKBH5Q6P6C2 394 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 TMC3Q7Z5M5 1100 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 GBP5Q96PP8 586 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ZMYND8Q9ULU4 1186 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 SERPING1P05155 500 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 LINGO3P0C6S8 592 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 RCN2Q14257 317 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ZFYVE27Q5T4F4 411 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ERMARDQ5T6L9 678 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 AGBL2Q5U5Z8 902 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 CDCA2Q69YH5 1023 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 CD302Q8IX05 232 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 MAB21L3Q8N8X9 362 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 FBXO25Q8TCJ0 367 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ERGIC2Q96RQ1 377 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 SEMA4AQ9H3S1 761 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 CIAO1O76071 339 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 RHOBTB3O94955 611 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 COPS2P61201 443 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 DR1Q01658 176 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 ITIH3Q06033 890 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 GJA10Q969M2 543 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 MTRF1LQ9UGC7 380 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 BCS1LQ9Y276 419 aa11.53□□□□□ -0.56
TRAPPC12-223ENST00000497597 CREB1P16220 341 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 PLCG2P16885 1265 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 CALML3P27482 149 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 NAB2Q15742 525 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 IFI16Q16666 785 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 P3H4Q92791 437 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.579e-8■■□□□ 13.8
TRAPPC12-223ENST00000497597 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 HAO1Q9UJM8 370 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 AMFRQ9UKV5 643 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 NR2E1Q9Y466 385 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 PPFIA2O75334 1257 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 PDE8BO95263 885 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 H2AFZP0C0S5 128 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 UBTFL6P0CB48 400 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 SERPINB4P48594 390 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 TMTC3Q6ZXV5 915 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 H2AFVQ71UI9 128 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 APBB1IPQ7Z5R6 666 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 DYDC2Q96IM9 177 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 VCXQ9H320 206 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 EBF2Q9HAK2 575 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.57
TRAPPC12-223ENST00000497597 KDM6AO15550 1401 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-223ENST00000497597 KLRC4O43908 158 aa11.51□□□□□ -0.57
TRAPPC12-223ENST00000497597 ZCCHC18P0CG32 403 aa11.51□□□□□ -0.57
TRAPPC12-223ENST00000497597 GHRP10912 638 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms