RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TMEM63BQ5T3F8 832 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 GJA10Q969M2 543 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 CALML4Q96GE6 196 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 CHAMP1Q96JM3 812 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 CLIC6Q96NY7 704 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 MMTAG2Q9BU76 263 aaKnown RBP22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 CRISPLD2Q9H0B8 497 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 AZI2Q9H6S1 392 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 BCAS3Q9H6U6 928 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 GDPD2Q9HCC8 539 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 HPSEQ9Y251 543 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 SAMM50Q9Y512 469 aa22.14■■□□□ 1.13
SCAMP3-209ENST00000497470 MOXD2PA6NHM9 499 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 DDX11L8A8MPP1 907 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 DDX39AO00148 427 aaKnown RBP22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 STAT5BP51692 787 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 CABP7Q86V35 215 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 CATSPER3Q86XQ3 398 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 MRPS27Q92552 414 aaKnown RBP22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 SYMPKQ92797 1274 aaKnown RBP22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 FAM167AQ96KS9 214 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 KATNAL1Q9BW62 490 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 UNC93B1Q9H1C4 597 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 STK17AQ9UEE5 414 aa22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 ZNF215Q9UL58 517 aaPredicted RBP22.13■■□□□ 1.13
SCAMP3-209ENST00000497470 F2P00734 622 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 MCM4P33991 863 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 TMEM119Q4V9L6 283 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 GJC2Q5T442 439 aaPredicted RBP22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 CCDC73Q6ZRK6 1079 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 ANKLE1Q8NAG6 615 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 SNX29Q8TEQ0 813 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 NACC1Q96RE7 527 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 C16orf70Q9BSU1 422 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 MCOLN1Q9GZU1 580 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 RNF208Q9H0X6 261 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 MAGEF1Q9HAY2 307 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 ZNF302Q9NR11 478 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 LMBRD1Q9NUN5 540 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 ERAP1Q9NZ08 941 aa22.12■■□□□ 1.13
SCAMP3-209ENST00000497470 CHMP2AO43633 222 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 LGALS2P05162 132 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 C6orf222P0C671 652 aaPredicted RBP22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 CCT6AP40227 531 aaKnown RBP22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 XKR3Q5GH77 459 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 GNASQ5JWF2 1037 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 SWSAP1Q6NVH7 229 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 CCDC60Q8IWA6 550 aaPredicted RBP22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 ELOA2Q8IYF1 753 aaPredicted RBP22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 EPSTI1Q96J88 318 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 PCYT2Q99447 389 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 ANKEF1Q9NU02 776 aa22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 DBR1Q9UK59 544 aaKnown RBP22.11■■□□□ 1.13
SCAMP3-209ENST00000497470 HAS3O00219 553 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 DNM1LO00429 736 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 PRPF40AO75400 957 aaKnown RBP22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 SGPL1O95470 568 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 GJA8P48165 433 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 PURAQ00577 322 aaKnown RBP22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 LRRC41Q15345 812 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 MTFR1Q15390 333 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 OTUD6AQ7L8S5 288 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 EXOC8Q8IYI6 725 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 IQUBQ8NA54 791 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 BBXQ8WY36 941 aaPredicted RBP22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 TIGD1Q96MW7 591 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 LXNQ9BS40 222 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 NIFKQ9BYG3 293 aaKnown RBP22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 NRBP2Q9NSY0 501 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 GABBR1Q9UBS5 961 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 KCNH3Q9ULD8 1083 aa22.1■■□□□ 1.13
SCAMP3-209ENST00000497470 H3BRB1 525 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 BACH1O14867 736 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 MED24O75448 989 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 PDXDC2PQ6P474 469 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 CCDC34Q96HJ3 373 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 DYDC2Q96IM9 177 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 CDK5RAP3Q96JB5 506 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 MTG1Q9BT17 334 aaPredicted RBP22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 TUT1Q9H6E5 874 aaKnown RBP22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 DNM3Q9UQ16 869 aa22.09■■□□□ 1.13
SCAMP3-209ENST00000497470 HBP1O60381 514 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 PGK1P00558 417 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 FAM160A1Q05DH4 1040 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 GRB10Q13322 594 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 ENGASEQ8NFI3 743 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 ATP8B4Q8TF62 1192 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 GLG1Q92896 1179 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 RGL1Q9NZL6 768 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 KCND2Q9NZV8 630 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 PHF24Q9UPV7 400 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 DOCK5Q9H7D0 1870 aa22.08■■□□□ 1.13
SCAMP3-209ENST00000497470 COL1A2P08123 1366 aa22.08■■□□□ 1.12
SCAMP3-209ENST00000497470 PP2D1A8MPX8 630 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 ZNF862O60290 1169 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 STBD1O95210 358 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 MBD3O95983 291 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 PFKFB1P16118 471 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 PTPN11Q06124 597 aaPredicted RBP22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 E2F4Q16254 413 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms