RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 LTFP02788 710 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PYGMP11217 842 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 EPXP11678 715 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 NID1P14543 1247 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 GBP1P32455 592 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 NEK4P51957 841 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 LACTBP83111 547 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 TMPRSS15P98073 1019 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 MOGSQ13724 837 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PDE3AQ14432 1141 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 MAPRE1Q15691 268 aaKnown RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 ARHGAP44Q17R89 818 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZFYVE27Q5T4F4 411 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PRAMEF13Q5VWM6 474 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 TDRD10Q5VZ19 366 aaKnown RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 SV2AQ7L0J3 742 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 OVCH1Q7RTY7 1134 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 SRGAP1Q7Z6B7 1085 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 SAPCD2Q86UD0 394 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 NPAS3Q8IXF0 933 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 CCDC144CPQ8IYA2 1237 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PHACTR4Q8IZ21 702 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 Q8N1Y9 231 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 CHST14Q8NCH0 376 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 COG1Q8WTW3 980 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 HHIPL1Q96JK4 782 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 FGD4Q96M96 766 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 LRFN3Q9BTN0 628 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 MAN1C1Q9NR34 630 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 AAASQ9NRG9 546 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 MBIPQ9NS73 344 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 C1orf112Q9NSG2 853 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 RNF186Q9NXI6 227 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PLA2G2EQ9NZK7 142 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 SAMD15Q9P1V8 674 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 LRP2BPQ9P2M1 347 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 USP25Q9UHP3 1055 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PDZRN3Q9UPQ7 1066 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 DCHS1Q96JQ0 3298 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 PIK3C2AO00443 1686 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 KANK1Q14678 1352 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 CRYBG1Q9Y4K1 1723 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 WDFY4Q6ZS81 3184 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 YTHDC2Q9H6S0 1430 aaKnown RBP3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF462Q96JM2 2506 aa3.1□□□□□ -1.91
CKS1BP2-201ENST00000497342 BTAF1O14981 1849 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ALS2Q96Q42 1657 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM187AA6NFU0 413 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 SHISA8B8ZZ34 492 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ARNTLO00327 626 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 TGM5O43548 720 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 SH3BP5O60239 455 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHGA12O60330 932 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PPFIA3O75145 1194 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 DEAF1O75398 565 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 DDNO94850 711 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZBED1O96006 694 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 TP53P04637 393 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ADH5P11766 374 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ATP2A2P16615 1042 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 MX2P20592 715 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 CD68P34810 354 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 USP14P54578 494 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 NOGQ13253 232 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PICALMQ13492 652 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 SAFBQ15424 915 aaKnown RBP eCLIP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 SF1Q15637 639 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 GRAMD1BQ3KR37 738 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PIK3R6Q5UE93 754 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 RCSD1Q6JBY9 416 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 GDF6Q6KF10 455 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 LBX2Q6XYB7 198 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 Q6ZS46 218 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 NKAPQ8N5F7 415 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 CLRN3Q8NCR9 226 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDH19Q8TAB3 1148 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ENOX1Q8TC92 643 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PANK1Q8TE04 598 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 FRS2Q8WU20 508 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ISL2Q96A47 359 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 TRMT2BQ96GJ1 504 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAXDC2Q96IV6 333 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZC3H10Q96K80 434 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 GUCD1Q96NT3 240 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ELAC2Q9BQ52 826 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZC3H12CQ9C0D7 883 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 CDIP1Q9H305 208 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 IGFLR1Q9H665 355 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 NGRNQ9NPE2 291 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ANLNQ9NQW6 1124 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF277Q9NRM2 450 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 GTF2IRD1Q9UHL9 959 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 RNF112Q9ULX5 631 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 NSFL1CQ9UNZ2 370 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 LUC7L2Q9Y383 392 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHB12Q9Y5F1 795 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHGA9Q9Y5G4 932 aaKnown RBP3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHGA8Q9Y5G5 932 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms