RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 RNF32Q9H0A6 362 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 SLC52A2Q9HAB3 445 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 TRIM39Q9HCM9 518 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 NMRK2Q9NPI5 230 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 GPR27Q9NS67 375 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 IMPACTQ9P2X3 320 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 WASHC2CQ9Y4E1 1318 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 CROCC2H7BZ55 1655 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 TET3O43151 1660 aa4.67□□□□□ -1.66
EXOSC3-208ENST00000496910 MSH6P52701 1360 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 PNPLA6Q8IY17 1366 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 EYSQ5T1H1 3165 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 TRBV23OR9-2A0A075B6M9 112 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 CCDC163A0A0D9SF12 145 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 MEFVO15553 781 aaPredicted RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 TBC1D8O95759 1140 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 FGAP02671 866 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 KRT18P05783 430 aaKnown RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 LTBRP36941 435 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 GALK1P51570 392 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 CORO7P57737 925 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 LAPTM5Q13571 262 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 TCEA2Q15560 299 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 VPS72Q15906 364 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 TM4SF20Q53R12 229 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 HLA-DQA1Q5Y7H0 255 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 RSPO2Q6UXX9 243 aaPredicted RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 C16orf71Q8IYS4 520 aaPredicted RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 PLEKHO2Q8TD55 490 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 DCAF4Q8WV16 495 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 LRRC59Q96AG4 307 aaKnown RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 SCLYQ96I15 445 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 PHF20Q9BVI0 1012 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 MRPL4Q9BYD3 311 aaKnown RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 FBXO9Q9UK97 447 aaPredicted RBP4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 TRAF6Q9Y4K3 522 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 MUC3AQ02505 3323 aa4.66□□□□□ -1.66
EXOSC3-208ENST00000496910 ADGRB2O60241 1585 aa4.65□□□□□ -1.66
EXOSC3-208ENST00000496910 TIAM1Q13009 1591 aa4.65□□□□□ -1.66
EXOSC3-208ENST00000496910 KMT2BQ9UMN6 2715 aaPredicted RBP4.65□□□□□ -1.66
EXOSC3-208ENST00000496910 ZFHX4Q86UP3 3567 aa4.65□□□□□ -1.66
EXOSC3-208ENST00000496910 PLD2O14939 933 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 MYL1P05976 194 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 STAT3P40763 770 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 HDAC1Q13547 482 aaPredicted RBP4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 C10orf62Q5T681 223 aaPredicted RBP4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 PPP4R4Q6NUP7 873 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 USP53Q70EK8 1073 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 SPPL2CQ8IUH8 684 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 LILRA2Q8N149 483 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 OXR1Q8N573 874 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 NAT16Q8N8M0 369 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 MYLIPQ8WY64 445 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 DIO2Q92813 273 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 PTPRN2Q92932 1015 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 CDC6Q99741 560 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 TNFRSF12AQ9NP84 129 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 PPARGC1AQ9UBK2 798 aaKnown RBP4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 CASP8AP2Q9UKL3 1982 aa4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 VIRMAQ69YN4 1812 aaKnown RBP4.65□□□□□ -1.67
EXOSC3-208ENST00000496910 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 ABCC3O15438 1527 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 SLIT2O94813 1529 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 A0A087X0B3 334 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 ZNF503-AS2A6NEH8 195 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 WTIPA6NIX2 430 aaPredicted RBP4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 ARVCFO00192 962 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 RFPL3O75679 317 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 GLI4P10075 376 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 KCNA6P17658 529 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 ATF3P18847 181 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 PMLP29590 882 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 GABREP78334 506 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 SNX17Q15036 470 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 BRD3Q15059 726 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 FNDC3BQ53EP0 1204 aaKnown RBP4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 XP32Q5T750 250 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 IQCEQ6IPM2 695 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 GALNT18Q6P9A2 607 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 LBX2Q6XYB7 198 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 MAMDC2Q7Z304 686 aaPredicted RBP4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 FGD2Q7Z6J4 655 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 UBR7Q8N806 425 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 TTC8Q8TAM2 541 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 CHAC2Q8WUX2 184 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 ZFYVE21Q9BQ24 234 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 CRTAC1Q9NQ79 661 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 GULP1Q9UBP9 304 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 PLAAQ9Y263 795 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 YBX2Q9Y2T7 364 aaKnown RBP4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 X6R8D5 127 aa4.64□□□□□ -1.67
EXOSC3-208ENST00000496910 ATP7AQ04656 1500 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 ALG1L2C9J202 215 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 WNT9AO14904 365 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 DNAJC8O75937 253 aaPredicted RBP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 RASGRP1O95267 797 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 FOSP01100 380 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms