RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 ADAMTS20P59510 1910 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 SLC12A8A0AV02 714 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 GLRX3O76003 335 aaKnown RBP7.11□□□□□ -1.27
SNX13-211ENST00000496855 C4BPAP04003 597 aaKnown RBP7.11□□□□□ -1.27
SNX13-211ENST00000496855 IL13P35225 146 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 MLLT6P55198 1093 aaPredicted RBP7.11□□□□□ -1.27
SNX13-211ENST00000496855 SEC23AQ15436 765 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 PRAMEF18Q5VWM3 479 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 CPZQ66K79 652 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 IGDCC4Q8TDY8 1250 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 NINJ1Q92982 152 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 FEZ1Q99689 392 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 PRAMEF25A6NGN4 478 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 OTOL1A6NHN0 477 aaPredicted RBP7.1□□□□□ -1.27
SNX13-211ENST00000496855 SCDO00767 359 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 ENPP3O14638 875 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 FLT3P36888 993 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 MECP2P51608 486 aaKnown RBP7.1□□□□□ -1.27
SNX13-211ENST00000496855 HERVK_113P62684 666 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 FAM26FQ5R3K3 315 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 PHF19Q5T6S3 580 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 FSTL4Q6MZW2 842 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 OTOP1Q7RTM1 612 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 SLC39A2Q9NP94 309 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 RAPGEFL1Q9UHV5 662 aa7.1□□□□□ -1.27
SNX13-211ENST00000496855 TLDC2A0PJX2 215 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 NOBOXO60393 691 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 JMJD7P0C870 316 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 HOXA5P20719 270 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 ARHGAP44Q17R89 818 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 TM4SF20Q53R12 229 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 NT5DC1Q5TFE4 455 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 PIK3R6Q5UE93 754 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 MCTP2Q6DN12 878 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 GIMAP6Q6P9H5 292 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 UBE2R2Q712K3 238 aaPredicted RBP7.09□□□□□ -1.27
SNX13-211ENST00000496855 KIAA0907Q7Z7F0 614 aaPredicted RBP7.09□□□□□ -1.27
SNX13-211ENST00000496855 ZDHHC14Q8IZN3 488 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 CHST14Q8NCH0 376 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 ZCCHC14Q8WYQ9 949 aaKnown RBP7.09□□□□□ -1.27
SNX13-211ENST00000496855 BOCQ9BWV1 1114 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 L2HGDHQ9H9P8 463 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 KCNH7Q9NS40 1196 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 ARHGAP28Q9P2N2 729 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 ZFP69BQ9UJL9 534 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 B3GALT1Q9Y5Z6 326 aa7.09□□□□□ -1.27
SNX13-211ENST00000496855 HMGB1P09429 215 aaKnown RBP7.08□□□□□ -1.28
SNX13-211ENST00000496855 ZBTB48P10074 688 aaPredicted RBP7.08□□□□□ -1.28
SNX13-211ENST00000496855 AOAHP28039 575 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 GLRBP48167 497 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 GJA9P57773 515 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 IRF9Q00978 393 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 RGL3Q3MIN7 710 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 CDCA2Q69YH5 1023 aaPredicted RBP7.08□□□□□ -1.28
SNX13-211ENST00000496855 PKN3Q6P5Z2 889 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 NIM1KQ8IY84 436 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 TXNDC5Q8NBS9 432 aaKnown RBP7.08□□□□□ -1.28
SNX13-211ENST00000496855 DLG3Q92796 817 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 WNK4Q96J92 1243 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 CABP5Q9NP86 173 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 PLAAQ9Y263 795 aa7.08□□□□□ -1.28
SNX13-211ENST00000496855 TRAF5O00463 557 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 HIP1RO75146 1068 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 FBXO21O94952 628 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 IL18BPO95998 194 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 CHGBP05060 677 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 COL6A1P12109 1028 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 SMAD2Q15796 467 aaKnown RBP7.07□□□□□ -1.28
SNX13-211ENST00000496855 CFAP100Q494V2 611 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 DALRD3Q5D0E6 543 aaKnown RBP7.07□□□□□ -1.28
SNX13-211ENST00000496855 TRMT10BQ6PF06 316 aaKnown RBP7.07□□□□□ -1.28
SNX13-211ENST00000496855 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
SNX13-211ENST00000496855 STPG3Q8N7X2 389 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 YTHDC1Q96MU7 727 aaKnown RBP7.07□□□□□ -1.28
SNX13-211ENST00000496855 KCND1Q9NSA2 647 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 USP40Q9NVE5 1235 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
SNX13-211ENST00000496855 PTGS1P23219 599 aa7.06□□□□□ -1.28
SNX13-211ENST00000496855 PLEKHG4Q58EX7 1191 aa7.06□□□□□ -1.28
SNX13-211ENST00000496855 FRMD5Q7Z6J6 570 aa7.06□□□□□ -1.28
SNX13-211ENST00000496855 LRRTM3Q86VH5 581 aa7.06□□□□□ -1.28
SNX13-211ENST00000496855 DHX37Q8IY37 1157 aaKnown RBP7.06□□□□□ -1.28
SNX13-211ENST00000496855 FTSJ1Q9UET6 329 aa7.06□□□□□ -1.28
SNX13-211ENST00000496855 TMA7Q9Y2S6 64 aaKnown RBP7.06□□□□□ -1.28
SNX13-211ENST00000496855 A0A0G2JLL6 359 aaPredicted RBP7.05□□□□□ -1.28
SNX13-211ENST00000496855 PTPDC1A2A3K4 754 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 CBX4O00257 560 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 FOXP2O15409 715 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 KNG1P01042 644 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 CYP1A1P04798 512 aaPredicted RBP7.05□□□□□ -1.28
SNX13-211ENST00000496855 MMEP08473 750 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 SDHAP31040 664 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 ASB15Q8WXK1 588 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 LCORQ96JN0 433 aaPredicted RBP7.05□□□□□ -1.28
SNX13-211ENST00000496855 C20orf173Q96LM9 149 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 TACO1Q9BSH4 297 aaKnown RBP7.05□□□□□ -1.28
SNX13-211ENST00000496855 TMEM168Q9H0V1 697 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 INCENPQ9NQS7 918 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms