RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 RAVER2Q9HCJ3 691 aaKnown RBP6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 ECHDC1Q9NTX5 307 aa6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 RNF19AQ9NV58 838 aa6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 CLIP2Q9UDT6 1046 aa6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 FOXD3Q9UJU5 478 aaPredicted RBP6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 FNDC3AQ9Y2H6 1198 aaKnown RBP6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 PCDHGC4Q9Y5F7 938 aa6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 MYH1P12882 1939 aa6.78□□□□□ -1.32
CACNA1C-229ENST00000496818 PNMA6FA0A0J9YX94 578 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 GPAA1O43292 621 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 BNIP3LO60238 219 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 SASH3O75995 380 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 SNAI1O95863 264 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 BMP3P12645 472 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 CSF2RAP15509 400 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 SLC1A4P43007 532 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 TKFCQ3LXA3 575 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 CCSAPQ6IQ19 270 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 FIGNL1Q6PIW4 674 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 CCDC144CPQ8IYA2 1237 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 TRIM22Q8IYM9 498 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 KBTBD3Q8NAB2 608 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 USP38Q8NB14 1042 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 CEP95Q96GE4 821 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 ABHD17AQ96GS6 310 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 MPHOSPH6Q99547 160 aaKnown RBP6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 AP5M1Q9H0R1 490 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 NAPBQ9H115 298 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 RNF146Q9NTX7 359 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 ZBTB40Q9NUA8 1239 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 TMEM63CQ9P1W3 806 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 RIPK3Q9Y572 518 aa6.77□□□□□ -1.33
CACNA1C-229ENST00000496818 RAD50Q92878 1312 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 CEP290O15078 2479 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 GSG1L2A8MUP6 293 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 SMIM22K7EJ46 135 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 PRDM1O75626 825 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 RPLP1P05386 114 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 PFKMP08237 780 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 ACRP10323 421 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 MAPTP10636 758 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 TNFAIP2Q03169 654 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 TNP2Q05952 138 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 UBAP2LQ14157 1087 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 FSCN1Q16658 493 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 TMEM240Q5SV17 173 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 SAMD5Q5TGI4 173 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 SLFN13Q68D06 897 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 RAB44Q7Z6P3 723 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 VWA5B2Q8N398 1253 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 HERVK_113Q902F9 699 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 STRBPQ96SI9 672 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 PRDM12Q9H4Q4 367 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 EPB41L4AQ9HCS5 686 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 IL23AQ9NPF7 189 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 A1CFQ9NQ94 594 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 MTMR4Q9NYA4 1195 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 HCN2Q9UL51 889 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 STX8Q9UNK0 236 aa6.76□□□□□ -1.33
CACNA1C-229ENST00000496818 COL6A3P12111 3177 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 IGKV6D-41A0A0C4DH26 115 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 TSPY2A6NKD2 308 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 TMEM232C9JQI7 657 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ERC2O15083 957 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 RNF113AO15541 343 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ADCY6O43306 1168 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 PPFIA3O75145 1194 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 TNFRSF21O75509 655 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 FGBP02675 491 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CHGBP05060 677 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ACTN1P12814 892 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ALAS1P13196 640 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CD33P20138 364 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CYP2C18P33260 490 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CPT1AP50416 773 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CDK7P50613 346 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 NKX3-2P78367 333 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 MRPS5P82675 430 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 BEX3Q00994 111 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ITGA7Q13683 1181 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 AAK1Q2M2I8 961 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CCDC96Q2M329 555 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 CXCL17Q6UXB2 119 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ZNF365Q70YC5 407 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 SKAP1Q86WV1 359 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 FBXO16Q8IX29 292 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 SIRT2Q8IXJ6 389 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 RPUSD2Q8IZ73 545 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 FAM133AQ8N9E0 248 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 GMCL1Q96IK5 515 aa6.75□□□□□ -1.33
CACNA1C-229ENST00000496818 ASB2Q96Q27 587 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms