RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 NFATC3Q12968 1075 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 R3HDM1Q15032 1099 aaKnown RBP5.68□□□□□ -1.5
CD46-218ENST00000496723 CYP4F22Q6NT55 531 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 ZFPM1Q8IX07 1006 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 PIP4K2CQ8TBX8 421 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 ZCCHC14Q8WYQ9 949 aaKnown RBP5.68□□□□□ -1.5
CD46-218ENST00000496723 ZSWIM3Q96MP5 696 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 IPPKQ9H8X2 491 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 SLC6A20Q9NP91 592 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 NDOR1Q9UHB4 597 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
CD46-218ENST00000496723 CCDC163A0A0D9SF12 145 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 ZNF623O75123 536 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 SPIRE1Q08AE8 756 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 PAK1Q13153 545 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 ZNF585AQ6P3V2 769 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 TRMT10BQ6PF06 316 aaKnown RBP5.67□□□□□ -1.5
CD46-218ENST00000496723 OTOP3Q7RTS5 596 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 SH3TC2Q8TF17 1288 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 WWC2-AS2Q96NR7 200 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 SLITRK6Q9H5Y7 841 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 KANSL2Q9H9L4 492 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 SLC52A2Q9HAB3 445 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 MYOTQ9UBF9 498 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 ADAM29Q9UKF5 820 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 PCDHA9Q9Y5H5 950 aa5.67□□□□□ -1.5
CD46-218ENST00000496723 OVOL3O00110 214 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 SLC27A2O14975 620 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 MUSKO15146 869 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 EFCAB14O75071 495 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 CRTAMO95727 393 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 AMHP03971 560 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 SQSTM1Q13501 440 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 TTLL11Q8NHH1 800 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 MENTQ9BUN1 341 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 SEC61A2Q9H9S3 476 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 ZDHHC9Q9Y397 364 aa5.66□□□□□ -1.5
CD46-218ENST00000496723 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.65□□□□□ -1.5
CD46-218ENST00000496723 NKRFO15226 690 aaKnown RBP eCLIP5.65□□□□□ -1.5
CD46-218ENST00000496723 SRGAP2CP0DJJ0 459 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 NAT1P18440 290 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 HS1BP3Q53T59 392 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 PALM2Q8IXS6 379 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 RBM12BQ8IXT5 1001 aaKnown RBP5.65□□□□□ -1.5
CD46-218ENST00000496723 GSTCDQ8NEC7 633 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 PCDH19Q8TAB3 1148 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 SLC7A14Q8TBB6 771 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 PCED1AQ9H1Q7 454 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 MEGF9Q9H1U4 602 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 ASH2LQ9UBL3 628 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 SFMBT1Q9UHJ3 866 aa5.65□□□□□ -1.5
CD46-218ENST00000496723 ARVCFO00192 962 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 KLHL18O94889 574 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 APPP05067 770 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 COL6A1P12109 1028 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 TRIM61Q5EBN2 209 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 TMC5Q6UXY8 1006 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 ZC3H7AQ8IWR0 971 aaKnown RBP5.64□□□□□ -1.51
CD46-218ENST00000496723 UHMK1Q8TAS1 419 aaKnown RBP5.64□□□□□ -1.51
CD46-218ENST00000496723 Q8TCH9 128 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 FBXW5Q969U6 566 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 MAGEB10Q96LZ2 347 aaPredicted RBP5.64□□□□□ -1.51
CD46-218ENST00000496723 PTPN18Q99952 460 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 MRPL4Q9BYD3 311 aaKnown RBP5.64□□□□□ -1.51
CD46-218ENST00000496723 NCOA5Q9HCD5 579 aaKnown RBP5.64□□□□□ -1.51
CD46-218ENST00000496723 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 CATSPERZQ9NTU4 200 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 DSEQ9UL01 958 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 WASF3Q9UPY6 502 aa5.64□□□□□ -1.51
CD46-218ENST00000496723 WNT9AO14904 365 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 RASGRP1O95267 797 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 LTFP02788 710 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 PYGMP11217 842 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 ST5P78524 1137 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 GRIN1Q05586 938 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 SMAD2Q15796 467 aaKnown RBP5.63□□□□□ -1.51
CD46-218ENST00000496723 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
CD46-218ENST00000496723 SPDYAQ5MJ70 313 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 VASNQ6EMK4 673 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 Q6ZUG5 572 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 BRAPQ7Z569 592 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 RALYLQ86SE5 291 aaKnown RBP5.63□□□□□ -1.51
CD46-218ENST00000496723 DTX3Q8N9I9 347 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 CLEC4DQ8WXI8 215 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 SCLYQ96I15 445 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 RNPC3Q96LT9 517 aaKnown RBP5.63□□□□□ -1.51
CD46-218ENST00000496723 PDGFDQ9GZP0 370 aaPredicted RBP5.63□□□□□ -1.51
CD46-218ENST00000496723 TMEM260Q9NX78 707 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
CD46-218ENST00000496723 ESYT3A0FGR9 886 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 PLD2O14939 933 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 GSTA4O15217 222 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 KCNQ2O43526 872 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 RANGAP1P46060 587 aaPredicted RBP5.62□□□□□ -1.51
CD46-218ENST00000496723 DNM2P50570 870 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 TUSC3Q13454 348 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 FAM47CQ5HY64 1035 aa5.62□□□□□ -1.51
CD46-218ENST00000496723 ARHGAP36Q6ZRI8 547 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms