RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 LENG9Q96B70 501 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 ORC3Q9UBD5 711 aaPredicted RBP16.44■□□□□ 0.22
PDAP1-204ENST00000496335 WDR81Q562E7 1941 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 PTPRSQ13332 1948 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 CHD9Q3L8U1 2897 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 PARNO95453 639 aaKnown RBP16.43■□□□□ 0.22
PDAP1-204ENST00000496335 INSRRP14616 1297 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 MYOGP15173 224 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 ATP2A2P16615 1042 aaKnown RBP16.43■□□□□ 0.22
PDAP1-204ENST00000496335 STAT5BP51692 787 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 USP11P51784 963 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 IGBP1P78318 339 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 SETQ01105 290 aaPredicted RBP16.43■□□□□ 0.22
PDAP1-204ENST00000496335 PLCB4Q15147 1175 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 PLPPR4Q7Z2D5 763 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 CDX2Q99626 313 aaPredicted RBP16.43■□□□□ 0.22
PDAP1-204ENST00000496335 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 MSRAQ9UJ68 235 aa16.43■□□□□ 0.22
PDAP1-204ENST00000496335 YBX2Q9Y2T7 364 aaKnown RBP16.43■□□□□ 0.22
PDAP1-204ENST00000496335 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 BACH1O14867 736 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 MSH4O15457 936 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 GALNT17Q6IS24 598 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 SWSAP1Q6NVH7 229 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 CNKSR3Q6P9H4 555 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
PDAP1-204ENST00000496335 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
PDAP1-204ENST00000496335 OXER1Q8TDS5 423 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 TRAPPC12Q8WVT3 735 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 GJA10Q969M2 543 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 KIF2CQ99661 725 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 ZNF576Q9H609 170 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 TBC1D22BQ9NU19 505 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 TUBE1Q9UJT0 475 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 TRPC6Q9Y210 931 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 STXBP5LQ9Y2K9 1186 aa16.42■□□□□ 0.22
PDAP1-204ENST00000496335 TMEM265A0A087WTH1 108 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 MBLAC1A4D2B0 266 aaPredicted RBP16.41■□□□□ 0.22
PDAP1-204ENST00000496335 JAK2O60674 1132 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 TDP2O95551 362 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 ST3GAL1Q11201 340 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 GRIN2CQ14957 1233 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDAP1-204ENST00000496335 RAB30Q15771 203 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 INF2Q27J81 1249 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 MIS18BP1Q6P0N0 1132 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 TMCO2Q7Z6W1 182 aaPredicted RBP16.41■□□□□ 0.22
PDAP1-204ENST00000496335 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
PDAP1-204ENST00000496335 DBF4BQ8NFT6 615 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 MYLIPQ8WY64 445 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 C22orf23Q9BZE7 217 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 EVPLQ92817 2033 aa16.41■□□□□ 0.22
PDAP1-204ENST00000496335 POTEB3A0JP26 581 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 RRN3P2A6NIE6 340 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 CAND2O75155 1236 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 BAIAP3O94812 1187 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 XBP1P17861 261 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 WDR5P61964 334 aaKnown RBP16.4■□□□□ 0.22
PDAP1-204ENST00000496335 FAM160B1Q5W0V3 765 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
PDAP1-204ENST00000496335 POTEBQ6S5H4 581 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 DNAJB3Q8WWF6 145 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 WASF1Q92558 559 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 ZNF302Q9NR11 478 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 PCDHA11Q9Y5I1 949 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 SIP14410 1827 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 MICAL3Q7RTP6 2002 aa16.4■□□□□ 0.22
PDAP1-204ENST00000496335 LOXHD1Q8IVV2 1947 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 CHD7Q9P2D1 2997 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 CYP3A7-CYP3A51PA0A087WV96 503 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 CHRNA1P02708 482 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 ATP4AP20648 1035 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 CYP3A7P24462 503 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 KCNJ6P48051 423 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 FOSBP53539 338 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 DEFB103AP81534 67 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 KRT76Q01546 638 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 IKBKEQ14164 716 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 Q4G0T1 1027 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 FAM26DQ5JW98 314 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 TAF2Q6P1X5 1199 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 PDXDC2PQ6P474 469 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
PDAP1-204ENST00000496335 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 PHOSPHO2Q8TCD6 241 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 SLC5A5Q92911 643 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 SLC9A7Q96T83 725 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
PDAP1-204ENST00000496335 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 PCDHA10Q9Y5I2 948 aa16.39■□□□□ 0.21
PDAP1-204ENST00000496335 CCDC194A0A1B0GVG4 234 aa16.38■□□□□ 0.21
PDAP1-204ENST00000496335 ABHD14A-ACY1A0A1B0GW23 586 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms