RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TRIM21P19474 475 aaKnown RBP7.67□□□□□ -1.18
USP39-219ENST00000496047 GTF2F1P35269 517 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP39-219ENST00000496047 CYLC1P35663 651 aaPredicted RBP7.67□□□□□ -1.18
USP39-219ENST00000496047 PPP2R3AQ06190 1150 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 COASYQ13057 564 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 MAN2A1Q16706 1144 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 CCDC40Q4G0X9 1142 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 LRCH2Q5VUJ6 765 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 TTI2Q6NXR4 508 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 NIPA1Q7RTP0 329 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 LDHDQ86WU2 507 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 SIAH1Q8IUQ4 282 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 SCYL3Q8IZE3 742 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 ETNPPLQ8TBG4 499 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 ACER1Q8TDN7 264 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 CEP63Q96MT8 703 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 TUBGCP2Q9BSJ2 902 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 ZNF577Q9BSK1 485 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 TMX1Q9H3N1 280 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 ZHX3Q9H4I2 956 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 SLC39A2Q9NP94 309 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 PRDM10Q9NQV6 1147 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 BLOC1S4Q9NUP1 217 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
USP39-219ENST00000496047 KCND2Q9NZV8 630 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 MAPK8IP1Q9UQF2 711 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 LUC7L2Q9Y383 392 aaKnown RBP7.67□□□□□ -1.18
USP39-219ENST00000496047 LCTP09848 1927 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 UBE4BO95155 1302 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 KAT6AQ92794 2004 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 TRIM49BA6NDI0 452 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 LRRC10BA6NIK2 292 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 DKC1O60832 514 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP39-219ENST00000496047 FAM13AO94988 1023 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 EYA4O95677 639 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 ITGBL1O95965 494 aaPredicted RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 SLURP2P0DP57 97 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 LMNB1P20700 586 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 RPL13P26373 211 aaKnown RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 HOXA13P31271 388 aaPredicted RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 CASQ1P31415 396 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 PBX1P40424 430 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 ADKP55263 362 aaKnown RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 SNAP25P60880 206 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 FKBP3Q00688 224 aaKnown RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 RASSF7Q02833 373 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 TBC1D8BQ0IIM8 1120 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 FSTL1Q12841 308 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 PPP2R5CQ13362 524 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 RRP1BQ14684 758 aaKnown RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 ARID5BQ14865 1188 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 SYCP1Q15431 976 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 SHROOM1Q2M3G4 852 aaPredicted RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 PROX2Q3B8N5 592 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 TKFCQ3LXA3 575 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 TBC1D10BQ4KMP7 808 aaPredicted RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 ARHGAP29Q52LW3 1261 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 CEP55Q53EZ4 464 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 HERC4Q5GLZ8 1057 aaPredicted RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 SH3D19Q5HYK7 790 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 CENPPQ6IPU0 288 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 NYAP1Q6ZVC0 841 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 CCDC84Q86UT8 332 aaPredicted RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 GPC2Q8N158 579 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 MB21D1Q8N884 522 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 TC2NQ8N9U0 490 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 NUCKS1Q9H1E3 243 aaKnown RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 DEFB129Q9H1M3 183 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 LUC7LQ9NQ29 371 aaKnown RBP7.66□□□□□ -1.18
USP39-219ENST00000496047 ABHD10Q9NUJ1 306 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 INTS13Q9NVM9 706 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 SEL1LQ9UBV2 794 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 FAM184BQ9ULE4 1060 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 PPP2R2CQ9Y2T4 447 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 COL4A3BPQ9Y5P4 624 aa7.66□□□□□ -1.18
USP39-219ENST00000496047 A0A1W2PQJ5 194 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 E9PMD0 336 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 PLXNB2O15031 1838 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 CETN3O15182 167 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 MSH4O15457 936 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 KIF5CO60282 957 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 BCRP11274 1271 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 FCER1AP12319 257 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 ALAS1P13196 640 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 SIP14410 1827 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 CASP14P31944 242 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 NF2P35240 595 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 KRT9P35527 623 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 HSD17B4P51659 736 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 OAZ1P54368 228 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 KRT83P78385 493 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 RBL2Q08999 1139 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 STK4Q13043 487 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 MTMR2Q13614 643 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 ALCAMQ13740 583 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 TUBB2AQ13885 445 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 EDRF1Q3B7T1 1238 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 FIGNQ5HY92 759 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms