RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 ZNF296Q8WUU4 475 aaPredicted RBP11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 PHKBQ93100 1093 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 SNX21Q969T3 373 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 TSPAN10Q9H1Z9 355 aaPredicted RBP11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 PORCNQ9H237 461 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 FBXO40Q9UH90 709 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 RIPK3Q9Y572 518 aa11.65□□□□□ -0.54
RAB11FIP3-211ENST00000495663 ZNF236Q9UL36 1845 aa11.65□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CASP8AP2Q9UKL3 1982 aa11.65□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ABCB11O95342 1321 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PLXNA1Q9UIW2 1896 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 hCG_1642624A0A1W2PR95 340 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 hCG_1984214I3L0E3 225 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 K7ELQ4 463 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ATP9BO43861 1147 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 DEXIO95424 95 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ERCC3P19447 782 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 FCGRTP55899 365 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ARHGEF6Q15052 776 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ALYREFQ86V81 257 aaKnown RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ZNF713Q8N859 430 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 LLPHQ9BRT6 129 aaKnown RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 EFCC1Q9HA90 598 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 AVENQ9NQS1 362 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HOMER2Q9NSB8 354 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 RNF146Q9NTX7 359 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PCDHA1Q9Y5I3 950 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 IVNS1ABPQ9Y6Y0 642 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 DOCK3Q8IZD9 2030 aa11.64□□□□□ -0.55
RAB11FIP3-211ENST00000495663 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PIK3R2O00459 728 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 TNPO2O14787 897 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 STRNO43815 780 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CTDNEP1O95476 244 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SCG2P13521 617 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PSMC4P43686 418 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ST3GAL1Q11201 340 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PFKFB3Q16875 520 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 GPR142Q7Z601 462 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 NSUN7Q8NE18 718 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 COA7Q96BR5 231 aa11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 MRPL11Q9Y3B7 192 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 FCER1AP12319 257 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 TAL1P17542 331 aaPredicted RBP11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 LBX1P52954 281 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HMGN5P82970 282 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 KCTD2Q14681 263 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PKN1Q16512 942 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 MUM1L1Q5H9M0 696 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SYT9Q86SS6 491 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 WASF1Q92558 559 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ARHGAP39Q9C0H5 1083 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 BARHL2Q9NY43 387 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ORC3Q9UBD5 711 aaPredicted RBP11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HCN4Q9Y3Q4 1203 aa11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
RAB11FIP3-211ENST00000495663 JAK2O60674 1132 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HOXD10P28358 340 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CTGFP29279 349 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 NAPAP54920 295 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SFSWAPQ12872 951 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CUL4AQ13619 759 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 LAMC2Q13753 1193 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 MCF2L2Q86YR7 1114 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 ANKRD35Q8N283 1001 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 TSEN2Q8NCE0 465 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SMARCC2Q8TAQ2 1214 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CCDC12Q8WUD4 166 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 CLEC4DQ8WXI8 215 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 DDX11Q96FC9 970 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 HSH2DQ96JZ2 352 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 MMP19Q99542 508 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 MAF1Q9H063 256 aa11.61□□□□□ -0.55
RAB11FIP3-211ENST00000495663 PFASO15067 1338 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 LCTP09848 1927 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 SFI1A8K8P3 1242 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 C1QTNF9BB2RNN3 333 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 STXBP3O00186 592 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 NFIBO00712 420 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 FURINP09958 794 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 XBP1P17861 261 aa11.6□□□□□ -0.55
RAB11FIP3-211ENST00000495663 GRB14Q14449 540 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms