RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 FBXO47Q5MNV8 452 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 RUFY4Q6ZNE9 571 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 ADHFE1Q8IWW8 467 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 GLG1Q92896 1179 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 FTHL17Q9BXU8 183 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
PCCB-219ENST00000494742 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
PCCB-219ENST00000494742 DGKIO75912 1065 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 MCM5P33992 734 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 LIFRP42702 1097 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 BTG3Q14201 252 aaPredicted RBP16.78■□□□□ 0.28
PCCB-219ENST00000494742 CSPP1Q1MSJ5 1256 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 NAALADL2Q58DX5 795 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 MARCH8Q5T0T0 291 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 IER5Q5VY09 327 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
PCCB-219ENST00000494742 DNAJB3Q8WWF6 145 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 P2RX5Q93086 422 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
PCCB-219ENST00000494742 MYL10Q9BUA6 226 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
PCCB-219ENST00000494742 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
PCCB-219ENST00000494742 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
PCCB-219ENST00000494742 CCDC69A6NI79 296 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 SPDYE3A6NKU9 549 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 GRM6O15303 877 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 PRC1O43663 620 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 MMP1P03956 469 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 LTBRP36941 435 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 MRPS6P82932 125 aaKnown RBP16.77■□□□□ 0.28
PCCB-219ENST00000494742 NFXL1Q6ZNB6 911 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 JADE2Q9NQC1 790 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 CDY2AQ9Y6F7 541 aa16.77■□□□□ 0.28
PCCB-219ENST00000494742 SH2B2O14492 632 aaPredicted RBP16.76■□□□□ 0.27
PCCB-219ENST00000494742 PLEKHA8P1O95397 391 aa16.76■□□□□ 0.27
PCCB-219ENST00000494742 MARK3P27448 753 aa16.76■□□□□ 0.27
PCCB-219ENST00000494742 HYAL1Q12794 435 aa16.76■□□□□ 0.27
PCCB-219ENST00000494742 SMAD2Q15796 467 aaKnown RBP16.76■□□□□ 0.27
PCCB-219ENST00000494742 CMTR2Q8IYT2 770 aaKnown RBP16.76■□□□□ 0.27
PCCB-219ENST00000494742 CRIPAKQ8N1N5 446 aa16.76■□□□□ 0.27
PCCB-219ENST00000494742 PPP2R3CQ969Q6 453 aa16.76■□□□□ 0.27
PCCB-219ENST00000494742 INSRRP14616 1297 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 NPAS4Q8IUM7 802 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 AZI2Q9H6S1 392 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
PCCB-219ENST00000494742 SLC9A2Q9UBY0 812 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 PCDHA6Q9UN73 950 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 PLAGL2Q9UPG8 496 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 PCDHA8Q9Y5H6 950 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 SLC12A7Q9Y666 1083 aa16.75■□□□□ 0.27
PCCB-219ENST00000494742 NFASCO94856 1347 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 MUC6Q6W4X9 2439 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 M0QZ92 97 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 MBTPS2O43462 519 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 CD52P31358 61 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 SLC26A2P50443 739 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 SMAD4Q13485 552 aaKnown RBP16.74■□□□□ 0.27
PCCB-219ENST00000494742 PLPPR4Q7Z2D5 763 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 NME8Q8N427 588 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 AGO3Q9H9G7 860 aaKnown RBP16.74■□□□□ 0.27
PCCB-219ENST00000494742 PCDHA2Q9Y5H9 948 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 TRPV2Q9Y5S1 764 aa16.74■□□□□ 0.27
PCCB-219ENST00000494742 IGSF9BQ9UPX0 1349 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 KDM3AQ9Y4C1 1321 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 IRS1P35568 1242 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 IGBP1P78318 339 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 ADAM15Q13444 863 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 UBE2SQ16763 222 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
PCCB-219ENST00000494742 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 LINC01599Q8WXQ3 324 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 UIMC1Q96RL1 719 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 PCYT2Q99447 389 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 MXRA8Q9BRK3 442 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 KCNH7Q9NS40 1196 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
PCCB-219ENST00000494742 PKD2L1Q9P0L9 805 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 MYO7AQ13402 2215 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 KIAA1671Q9BY89 1806 aa16.73■□□□□ 0.27
PCCB-219ENST00000494742 LOXHD1Q8IVV2 1947 aa16.72■□□□□ 0.27
PCCB-219ENST00000494742 SMIM35A0A1B0GVV1 85 aa16.72■□□□□ 0.27
PCCB-219ENST00000494742 FOSP01100 380 aaPredicted RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 DLX2Q07687 328 aaPredicted RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 CAMK1Q14012 370 aa16.72■□□□□ 0.27
PCCB-219ENST00000494742 RTN4RL1Q86UN2 441 aaPredicted RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 CELF4Q9BZC1 486 aaKnown RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 FAM49AQ9H0Q0 323 aaPredicted RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 ALG13Q9NP73 1137 aaKnown RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 CD207Q9UJ71 328 aa16.72■□□□□ 0.27
PCCB-219ENST00000494742 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
PCCB-219ENST00000494742 MRPL42Q9Y6G3 142 aaKnown RBP16.72■□□□□ 0.27
PCCB-219ENST00000494742 PIEZO1Q92508 2521 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms