RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TRIM43BA6NCK2 446 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 DCDC2CA8MYV0 355 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 H0YGN5 161 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 TECP42680 631 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 CYP4A11Q02928 519 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 ZNF746Q6NUN9 644 aaPredicted RBP12.54□□□□□ -0.4
APTX-230ENST00000494649 PDXDC2PQ6P474 469 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 TRIM43Q96BQ3 446 aaPredicted RBP12.54□□□□□ -0.4
APTX-230ENST00000494649 NAP1L4Q99733 375 aaKnown RBP12.54□□□□□ -0.4
APTX-230ENST00000494649 KATNAL1Q9BW62 490 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 PDLIM7Q9NR12 457 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 PCDHA12Q9UN75 941 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 PCDHA10Q9Y5I2 948 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 A0A087WWV3 80 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 WDR64B1ANS9 1081 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 HAS3O00219 553 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
APTX-230ENST00000494649 PSAPP07602 524 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 CLTBP09497 229 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
APTX-230ENST00000494649 RESTQ13127 1097 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 PTGDRQ13258 359 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 PTGISQ16647 500 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 MTMR9Q96QG7 549 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 RGL1Q9NZL6 768 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 ATG7O95352 703 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 ATP4AP20648 1035 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 ANKRD33Q7Z3H0 272 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 SMAP1Q8IYB5 467 aaPredicted RBP12.53□□□□□ -0.4
APTX-230ENST00000494649 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 SLC43A3Q8NBI5 491 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
APTX-230ENST00000494649 EMSYQ7Z589 1322 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 TREHO43280 583 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 LGR5O75473 907 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 TRAPPC10P48553 1259 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 CTTNQ14247 550 aaKnown RBP12.52□□□□□ -0.4
APTX-230ENST00000494649 PLCB4Q15147 1175 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 LMBR1Q8WVP7 490 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 WNT8BQ93098 351 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.4
APTX-230ENST00000494649 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.4
APTX-230ENST00000494649 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 IGKV6D-21A0A0A0MT36 114 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 C17orf102A2RUQ5 167 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 TBX3O15119 743 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 ZNF862O60290 1169 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 CD4P01730 458 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 INSRRP14616 1297 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 CDC25AP30304 524 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 CYP2C18P33260 490 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 CCL23P55773 120 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 PPP2R5CQ13362 524 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 FAM160B1Q5W0V3 765 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 B3GNT9Q6UX72 402 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 ATP6V0A1Q93050 837 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.41
APTX-230ENST00000494649 NR2E3Q9Y5X4 410 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 CLIC4Q9Y696 253 aa12.52□□□□□ -0.41
APTX-230ENST00000494649 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 ZBTB39O15060 712 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
APTX-230ENST00000494649 JAK3P52333 1124 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 PRKCEQ02156 737 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
APTX-230ENST00000494649 GRIK4Q16099 956 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 IL17AQ16552 155 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 BRAPQ7Z569 592 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 DYDC2Q96IM9 177 aa12.51□□□□□ -0.41
APTX-230ENST00000494649 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
APTX-230ENST00000494649 RAG1P15918 1043 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 SFNP31947 248 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 PLPPR4Q7Z2D5 763 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 TPH2Q8IWU9 490 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 BADQ92934 168 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 SCLYQ96I15 445 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 TOX2Q96NM4 488 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 HIPK3Q9H422 1215 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms