RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 KRTAP1-5Q9BYS1 174 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 NKX2-4Q9H2Z4 354 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 C12orf65Q9H3J6 166 aaKnown RBP3.48□□□□□ -1.85
PTPN12-212ENST00000494248 SMOC1Q9H4F8 434 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 CYP26B1Q9NR63 512 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 AURKAIP1Q9NWT8 199 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-212ENST00000494248 ARHGAP20Q9P2F6 1191 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 NR2E1Q9Y466 385 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
PTPN12-212ENST00000494248 H7BY64 318 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 SLC27A2O14975 620 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 LTFP02788 710 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 NFYCQ13952 458 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 ZNF568Q3ZCX4 644 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 ZNF394Q53GI3 561 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 CCDC81Q6ZN84 652 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 MRGPREQ86SM8 312 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 SGMS1Q86VZ5 419 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 TRIM59Q8IWR1 403 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 TMEM87AQ8NBN3 555 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 BVESQ8NE79 360 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 TTLL11Q8NHH1 800 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 DIO2Q92813 273 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 MRGPRX3Q96LB0 322 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 RIOX1Q9H6W3 641 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 PARPBPQ9NWS1 579 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 GIT1Q9Y2X7 761 aa3.47□□□□□ -1.85
PTPN12-212ENST00000494248 ESYT3A0FGR9 886 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 ZBTB7CA1YPR0 619 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 TBX1O43435 398 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 PEX11BO96011 259 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 POLD1P28340 1107 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 RPS19P39019 145 aaKnown RBP3.46□□□□□ -1.86
PTPN12-212ENST00000494248 CASP7P55210 303 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 EIF6P56537 245 aaKnown RBP3.46□□□□□ -1.86
PTPN12-212ENST00000494248 KCNAB2Q13303 367 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 EPHA10Q5JZY3 1008 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 ZNF362Q5T0B9 420 aaPredicted RBP3.46□□□□□ -1.86
PTPN12-212ENST00000494248 ACBD5Q5T8D3 534 aaPredicted RBP3.46□□□□□ -1.86
PTPN12-212ENST00000494248 CD276Q5ZPR3 534 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 DENND5AQ6IQ26 1287 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 SYCE2Q6PIF2 218 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 LARP4Q71RC2 724 aaKnown RBP eCLIP3.46□□□□□ -1.86
PTPN12-212ENST00000494248 PHOSPHO1Q8TCT1 267 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 GIPC2Q8TF65 315 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 KIAA1683Q9H0B3 1180 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 PRDM13Q9H4Q3 707 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 SYNPO2LQ9H987 977 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 AGO3Q9H9G7 860 aaKnown RBP3.46□□□□□ -1.86
PTPN12-212ENST00000494248 GINM1Q9NU53 330 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 CLDND1Q9NY35 253 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 ZNHIT2Q9UHR6 403 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 TELO2Q9Y4R8 837 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 PCDHGB7Q9Y5F8 929 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 PCDHA2Q9Y5H9 948 aa3.46□□□□□ -1.86
PTPN12-212ENST00000494248 A0A0A6YYK5 440 aaPredicted RBP3.45□□□□□ -1.86
PTPN12-212ENST00000494248 ZNF839A8K0R7 811 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 ARHGAP6O43182 974 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 DGKIO75912 1065 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 SCG5P05408 212 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 HMGB1P09429 215 aaKnown RBP3.45□□□□□ -1.86
PTPN12-212ENST00000494248 NAT2P11245 290 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 FAHP16930 419 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 RACK1P63244 317 aaKnown RBP3.45□□□□□ -1.86
PTPN12-212ENST00000494248 LSAMPQ13449 338 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 SF1Q15637 639 aaKnown RBP3.45□□□□□ -1.86
PTPN12-212ENST00000494248 PRSS53Q2L4Q9 553 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 KIAA1211LQ6NV74 962 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 ADGRG3Q86Y34 549 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 PIP4K2CQ8TBX8 421 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 RASGRP4Q8TDF6 673 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 GZF1Q9H116 711 aaPredicted RBP3.45□□□□□ -1.86
PTPN12-212ENST00000494248 NRDE2Q9H7Z3 1164 aa3.45□□□□□ -1.86
PTPN12-212ENST00000494248 DDX41Q9UJV9 622 aaKnown RBP3.45□□□□□ -1.86
PTPN12-212ENST00000494248 SHROOM4Q9ULL8 1493 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 LOC105371045A0A1W2PR82 267 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 SERINC4A6NH21 518 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 CAPN14A8MX76 684 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 MYO1BO43795 1136 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 CLK3P49761 638 aaKnown RBP3.44□□□□□ -1.86
PTPN12-212ENST00000494248 SCNN1GP51170 649 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 GRM7Q14831 915 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 PAN2Q504Q3 1202 aaKnown RBP3.44□□□□□ -1.86
PTPN12-212ENST00000494248 CYP4F22Q6NT55 531 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 VHLLQ6RSH7 139 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 Q6ZRM9 215 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 BTN2A2Q8WVV5 523 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 TMEM176AQ96HP8 235 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 SHDQ96IW2 340 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 JAM3Q9BX67 310 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 EPB41L1Q9H4G0 881 aa3.44□□□□□ -1.86
PTPN12-212ENST00000494248 ZAR1LA6NP61 321 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 NOP56O00567 594 aaKnown RBP3.43□□□□□ -1.86
PTPN12-212ENST00000494248 ENO2P09104 434 aaPredicted RBP3.43□□□□□ -1.86
PTPN12-212ENST00000494248 TUSC3Q13454 348 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 GPR162Q16538 588 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 ZMAT1Q5H9K5 638 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 THEMISQ8N1K5 641 aaPredicted RBP3.43□□□□□ -1.86
PTPN12-212ENST00000494248 D2HGDHQ8N465 521 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms