RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 VCANP13611 3396 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 FAM86B1E9PN63 330 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 MEIS1O00470 390 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 PRPF3O43395 683 aaKnown RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 LGR5O75473 907 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 BAIAP3O94812 1187 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 FAM86B2P0C5J1 330 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 SREBF1P36956 1147 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 KCNJ6P48051 423 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 TAP1Q03518 808 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 CEP55Q53EZ4 464 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 KRT40Q6A162 431 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 RUFY3Q7L099 469 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 FBXL16Q8N461 479 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 GIMAP8Q8ND71 665 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 RASGRP4Q8TDF6 673 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 ARNTL2Q8WYA1 636 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 GLG1Q92896 1179 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 GAS2L1Q99501 681 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 SLC26A6Q9BXS9 759 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 UPF3BQ9BZI7 483 aaKnown RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 JPH1Q9HDC5 661 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 ZNF215Q9UL58 517 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-219ENST00000494069 NID2Q14112 1375 aa9.75□□□□□ -0.85
LRCH3-219ENST00000494069 REV3LO60673 3130 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 CCDC196A0A1B0GTZ2 297 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 ABHD14A-ACY1A0A1B0GW23 586 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 hCG_1984214I3L0E3 225 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 DDX39AO00148 427 aaKnown RBP9.74□□□□□ -0.85
LRCH3-219ENST00000494069 EDIL3O43854 480 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 TLL1O43897 1013 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 PARNO95453 639 aaKnown RBP9.74□□□□□ -0.85
LRCH3-219ENST00000494069 CCNE2O96020 404 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 FOSP01100 380 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-219ENST00000494069 CHRNA1P02708 482 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 GNAT1P11488 350 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 PSMA5P28066 241 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 EVCP57679 992 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 ACTR2P61160 394 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 IGBP1P78318 339 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 PPFIA1Q13136 1202 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
LRCH3-219ENST00000494069 IKBKEQ14164 716 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 GRIK4Q16099 956 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 MARCH8Q5T0T0 291 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 ZNF713Q8N859 430 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-219ENST00000494069 TRAPPC12Q8WVT3 735 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 CRYGNQ8WXF5 182 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 ZMYND12Q9H0C1 365 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 PPP4R2Q9NY27 417 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 ERAP1Q9NZ08 941 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 VPS54Q9P1Q0 977 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 SLC9A2Q9UBY0 812 aa9.74□□□□□ -0.85
LRCH3-219ENST00000494069 IGLV3-22A0A075B6J6 115 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 ESYT2A0FGR8 921 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 KIF28PB7ZC32 967 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 MAFGO15525 162 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 GJB5O95377 273 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 INSRRP14616 1297 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 IFNAR1P17181 557 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 ZNF76P36508 570 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 MGAT3Q09327 533 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 STK3Q13188 491 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 PLCB4Q15147 1175 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 FAM26DQ5JW98 314 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 PLA2G4DQ86XP0 818 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 MYOCDQ8IZQ8 938 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 DNAJB3Q8WWF6 145 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 AIFM3Q96NN9 605 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 SDF4Q9BRK5 362 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 ZBED2Q9BTP6 218 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 SMARCAD1Q9H4L7 1026 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 NFASCO94856 1347 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 NRCAMQ92823 1304 aa9.73□□□□□ -0.85
LRCH3-219ENST00000494069 SPTBN5Q9NRC6 3674 aaKnown RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 MBLAC1A4D2B0 266 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 DHX15O43143 795 aaKnown RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 ATG7O95352 703 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 CYP3A4P08684 503 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 GHRP10912 638 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 STAT5BP51692 787 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 GRB10Q13322 594 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 REXO1Q8N1G1 1221 aaKnown RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 SEPT8Q92599 483 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 RAD9AQ99638 391 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 RNF26Q9BY78 433 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 FAM49AQ9H0Q0 323 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-219ENST00000494069 GLT8D2Q9H1C3 349 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 C6orf50Q9HD87 102 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 TUBE1Q9UJT0 475 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms