RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 VGLL4Q14135 290 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 GPR162Q16538 588 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 EDRF1Q3B7T1 1238 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 HERC4Q5GLZ8 1057 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-208ENST00000494028 FIGNQ5HY92 759 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 FKBP15Q5T1M5 1219 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 SNRNP48Q6IEG0 339 aaKnown RBP11.8□□□□□ -0.52
CLCN6-208ENST00000494028 RINT1Q6NUQ1 792 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 TRIM65Q6PJ69 517 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 RNF207Q6ZRF8 634 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 CPLX3Q8WVH0 158 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 TRERF1Q96PN7 1200 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 ZHX3Q9H4I2 956 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 RIPK3Q9Y572 518 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 PAXBP1Q9Y5B6 917 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 ADGRG1Q9Y653 693 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 ASTN1O14525 1302 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 UBE4BO95155 1302 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 ATP2A1O14983 1001 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 DHX15O43143 795 aaKnown RBP11.79□□□□□ -0.52
CLCN6-208ENST00000494028 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-208ENST00000494028 SLITRK3O94933 977 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 KIF20AO95235 890 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 CCDC175P0C221 793 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 GAP43P17677 238 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 HOXD13P35453 343 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 MARSP56192 900 aaKnown RBP11.79□□□□□ -0.52
CLCN6-208ENST00000494028 FKBP3Q00688 224 aaKnown RBP11.79□□□□□ -0.52
CLCN6-208ENST00000494028 MTMR1Q13613 665 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 MEA1Q16626 185 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 VWA3BQ502W6 1294 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 NSMFQ6X4W1 530 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 SYT10Q6XYQ8 523 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 CATSPERGQ6ZRH7 1159 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-208ENST00000494028 C1orf186Q6ZWK4 172 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 PIGOQ8TEQ8 1089 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 ZNF592Q92610 1267 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 BCAS3Q9H6U6 928 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 KCNH7Q9NS40 1196 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 TMOD4Q9NZQ9 345 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 CAPN11Q9UMQ6 739 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
CLCN6-208ENST00000494028 A0A1W2PQJ5 194 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLCN6-208ENST00000494028 CTIFO43310 598 aaKnown RBP11.78□□□□□ -0.52
CLCN6-208ENST00000494028 FAM13AO94988 1023 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 ZNF131P52739 623 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 ETF1P62495 437 aaKnown RBP11.78□□□□□ -0.52
CLCN6-208ENST00000494028 TBC1D8BQ0IIM8 1120 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 MAPK7Q13164 816 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-208ENST00000494028 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 DLK2Q6UY11 383 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 MIER3Q7Z3K6 550 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 TMTC1Q8IUR5 882 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 TRIM59Q8IWR1 403 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 TPH2Q8IWU9 490 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 ACRBPQ8NEB7 543 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 KIF18AQ8NI77 898 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 IQCDQ96DY2 449 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
CLCN6-208ENST00000494028 FIZ1Q96SL8 496 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 NDST4Q9H3R1 872 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 TRAF3IP3Q9Y228 551 aa11.78□□□□□ -0.52
CLCN6-208ENST00000494028 UTRNP46939 3433 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 A0A0U1RQJ8 604 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 ARHGEF35A5YM69 484 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 EPHB6O15197 1021 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 GRIN3BO60391 1043 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 LYPLA2O95372 231 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 TUBB4AP04350 444 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 GUCY2CP25092 1073 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 CCND2P30279 289 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 PRKG1Q13976 671 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 UGCGQ16739 394 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 XRRA1Q6P2D8 792 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 ATRIPQ8WXE1 791 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 TSC1Q92574 1164 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 NACC1Q96RE7 527 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 NUP58Q9BVL2 599 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 ACAD9Q9H845 621 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 L2HGDHQ9H9P8 463 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 TYW1Q9NV66 732 aaKnown RBP11.77□□□□□ -0.53
CLCN6-208ENST00000494028 KCND2Q9NZV8 630 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms