RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 KINO60870 393 aaKnown RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 CUTAO60888 179 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 DDAH1O94760 285 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 BAG3O95817 575 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 CALM1P0DP23 149 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 CALM2P0DP24 149 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 CALM3P0DP25 149 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 VEGFAP15692 232 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 PFKFB1P16118 471 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 HMGB2P26583 209 aaKnown RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 ZNF165P49910 485 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 PLCD1P51178 756 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 TFAP4Q01664 338 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 PDE4BQ07343 736 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 NPY5RQ15761 445 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 GRIK4Q16099 956 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 RESP18Q5W5W9 173 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 TMTC3Q6ZXV5 915 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 TMC4Q7Z404 712 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 IQCA1Q86XH1 822 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 DIS3L2Q8IYB7 885 aaKnown RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 TIGD1Q96MW7 591 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 ZNF830Q96NB3 372 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 CLIC6Q96NY7 704 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 PHF20Q9BVI0 1012 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 EHD4Q9H223 541 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 TCP11L1Q9NUJ3 509 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 RBM28Q9NW13 759 aaKnown RBP6.88□□□□□ -1.31
CPSF7-213ENST00000494016 MCM9Q9NXL9 1143 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 ZKSCAN5Q9Y2L8 839 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 ATP6V0A2Q9Y487 856 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 CD2APQ9Y5K6 639 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 DLL1O00548 723 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 TM4SF5O14894 197 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 ADAMTS3O15072 1205 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 CAVIN2O95810 425 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 SRGNP10124 158 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 SELPP16109 830 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 GRIA4P48058 902 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 ZNF75DP51815 510 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 RHBDL3P58872 404 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 SAFBQ15424 915 aaKnown RBP eCLIP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 SLC35G1Q2M3R5 365 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 EARS2Q5JPH6 523 aaKnown RBP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 ALG1LQ6GMV1 187 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 FAM117BQ6P1L5 589 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 OLFM4Q6UX06 510 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 VN1R5Q7Z5H4 357 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 PLA2G4DQ86XP0 818 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 DGKHQ86XP1 1220 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 NPAS4Q8IUM7 802 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 FOXP4Q8IVH2 680 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 DHX40Q8IX18 779 aaKnown RBP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 ASAP3Q8TDY4 903 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 ERCC4Q92889 916 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 WNT8BQ93098 351 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 NACC1Q96RE7 527 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 SDF4Q9BRK5 362 aa6.87□□□□□ -1.31
CPSF7-213ENST00000494016 FBXO2Q9UK22 296 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.87□□□□□ -1.31
CPSF7-213ENST00000494016 MYH1P12882 1939 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 ROBO3Q96MS0 1386 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 NAV1Q8NEY1 1877 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 GAKO14976 1311 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 A0A096LPE4 126 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 TSPY2A6NKD2 308 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 FSCN2O14926 492 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 OFD1O75665 1012 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 TOMM70O94826 608 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 TCF3P15923 654 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 NPR1P16066 1061 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 ERCC3P19447 782 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 CDC25BP30305 580 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 BTDP43251 543 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 CDK8P49336 464 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 NT5C2P49902 561 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 NLRP12P59046 1061 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 ATP2B2Q01814 1243 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 AKAP17AQ02040 695 aaKnown RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 GRIN1Q05586 938 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 GRM2Q14416 872 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 GRM4Q14833 912 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 STX1AQ16623 288 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 SLC4A8Q2Y0W8 1093 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 CD163Q86VB7 1156 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 MAPKAPK5Q8IW41 473 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 ELOA2Q8IYF1 753 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-213ENST00000494016 CERS5Q8N5B7 392 aa6.86□□□□□ -1.31
CPSF7-213ENST00000494016 SLC44A5Q8NCS7 719 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms