RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SETQ01105 290 aaPredicted RBP13.22□□□□□ -0.29
UBA3-211ENST00000493957 TRIM29Q14134 588 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 VARS2Q5ST30 1063 aaKnown RBP13.22□□□□□ -0.29
UBA3-211ENST00000493957 NFRKBQ6P4R8 1299 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 FAM184AQ8NB25 1140 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 SEPT1Q8WYJ6 367 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 BADQ92934 168 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 MBOAT7Q96N66 472 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 PPP1R12CQ9BZL4 782 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 PRO3102Q9H379 93 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
UBA3-211ENST00000493957 CYP3A7-CYP3A51PA0A087WV96 503 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
UBA3-211ENST00000493957 CYP3A7P24462 503 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 MARK3P27448 753 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 CYP2C18P33260 490 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 CUL4AQ13619 759 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 Q4G0T1 1027 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 ETNPPLQ8TBG4 499 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 WNT8BQ93098 351 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 GDF15Q99988 308 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 DDX25Q9UHL0 483 aaKnown RBP13.21□□□□□ -0.29
UBA3-211ENST00000493957 GTF2IRD1Q9UHL9 959 aa13.21□□□□□ -0.29
UBA3-211ENST00000493957 LGR5O75473 907 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 SMIM10L2AP0DMW4 78 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 SMIM10L2BP0DMW5 78 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 EPHB4P54760 987 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 MOXD1Q6UVY6 613 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 CCDC60Q8IWA6 550 aaPredicted RBP13.2□□□□□ -0.3
UBA3-211ENST00000493957 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
UBA3-211ENST00000493957 SLC5A5Q92911 643 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 NOC4LQ9BVI4 516 aaKnown RBP13.2□□□□□ -0.3
UBA3-211ENST00000493957 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 PRKAG2Q9UGJ0 569 aa13.2□□□□□ -0.3
UBA3-211ENST00000493957 EMSYQ7Z589 1322 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 CHMP2AO43633 222 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 CCNT1O60563 726 aaKnown RBP13.19□□□□□ -0.3
UBA3-211ENST00000493957 PSMD10O75832 226 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 ATG7O95352 703 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 SUPT20HL2P0C7V6 817 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 RAG1P15918 1043 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
UBA3-211ENST00000493957 PTGISQ16647 500 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 LRCH2Q5VUJ6 765 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 ZBTB10Q96DT7 871 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 HIPK3Q9H422 1215 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
UBA3-211ENST00000493957 MICAL3Q7RTP6 2002 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 K7ELQ4 463 aaPredicted RBP13.18□□□□□ -0.3
UBA3-211ENST00000493957 GAS7O60861 476 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 TIMP1P01033 207 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 ATP4AP20648 1035 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 HOXC8P31273 242 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 CCL23P55773 120 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 NBR1Q14596 966 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 SAFBQ15424 915 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBA3-211ENST00000493957 UGCGQ16739 394 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 HAS1Q92839 578 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 GLG1Q92896 1179 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 SCLYQ96I15 445 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 LBHD1Q9BQE6 289 aaPredicted RBP13.18□□□□□ -0.3
UBA3-211ENST00000493957 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 KCNMB3Q9NPA1 279 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
UBA3-211ENST00000493957 EML1O00423 815 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 BACH1O14867 736 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 TREHO43280 583 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 CSF2RAP15509 400 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 GCFC2P16383 781 aaKnown RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 KRT76Q01546 638 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 PLCB4Q15147 1175 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 VWCEQ96DN2 955 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 RIT2Q99578 217 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 TEKT3Q9BXF9 490 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 TMEM60Q9H2L4 133 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 FOXP1Q9H334 677 aaPredicted RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 SMARCAD1Q9H4L7 1026 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms