RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 WDR81Q562E7 1941 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 DNM1LO00429 736 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 ATG7O95352 703 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 MYL3P08590 195 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 HOXD8P13378 290 aaPredicted RBP16.71■□□□□ 0.27
ACTB-213ENST00000493945 RPA1P27694 616 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 UBE2HP62256 183 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 SPIRE1Q08AE8 756 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 GJC2Q5T442 439 aaPredicted RBP16.71■□□□□ 0.27
ACTB-213ENST00000493945 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
ACTB-213ENST00000493945 B3GNT9Q6UX72 402 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 ABHD15Q6UXT9 468 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 PLPPR4Q7Z2D5 763 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 EXOC8Q8IYI6 725 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 ANKLE1Q8NAG6 615 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 EIF2AK1Q9BQI3 630 aaKnown RBP16.71■□□□□ 0.27
ACTB-213ENST00000493945 LXNQ9BS40 222 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 MTG1Q9BT17 334 aaPredicted RBP16.71■□□□□ 0.27
ACTB-213ENST00000493945 CCSER1Q9C0I3 900 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 PPME1Q9Y570 386 aa16.71■□□□□ 0.27
ACTB-213ENST00000493945 IGSF9BQ9UPX0 1349 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 KAT6AQ92794 2004 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 ADAMTS4O75173 837 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 LGR5O75473 907 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 CCNE2O96020 404 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 PGK1P00558 417 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 MYCP01106 439 aaPredicted RBP16.7■□□□□ 0.26
ACTB-213ENST00000493945 TFRCP02786 760 aaKnown RBP16.7■□□□□ 0.26
ACTB-213ENST00000493945 LGALS2P05162 132 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 CMA1P23946 247 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 MTFR1Q15390 333 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
ACTB-213ENST00000493945 SYMPKQ92797 1274 aaKnown RBP16.7■□□□□ 0.26
ACTB-213ENST00000493945 GJA10Q969M2 543 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 LENG1Q96BZ8 264 aaPredicted RBP16.7■□□□□ 0.26
ACTB-213ENST00000493945 GLT1D1Q96MS3 346 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 MAGEF1Q9HAY2 307 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 NRBP2Q9NSY0 501 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 GABBR1Q9UBS5 961 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 STK17AQ9UEE5 414 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 USP25Q9UHP3 1055 aa16.7■□□□□ 0.26
ACTB-213ENST00000493945 ADCY6O43306 1168 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 SGPL1O95470 568 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 LRRC41Q15345 812 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 XKR3Q5GH77 459 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 SWSAP1Q6NVH7 229 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 TPH2Q8IWU9 490 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 C4orf19Q8IY42 314 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 IQUBQ8NA54 791 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
ACTB-213ENST00000493945 BBXQ8WY36 941 aaPredicted RBP16.69■□□□□ 0.26
ACTB-213ENST00000493945 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 JPH2Q9BR39 696 aaPredicted RBP16.69■□□□□ 0.26
ACTB-213ENST00000493945 LRRC27Q9C0I9 530 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 HOOK1Q9UJC3 728 aaKnown RBP16.69■□□□□ 0.26
ACTB-213ENST00000493945 OGDHLQ9ULD0 1010 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 DNM3Q9UQ16 869 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
ACTB-213ENST00000493945 IGKV6D-21A0A0A0MT36 114 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 GSTTP1A0A1W2PQM5 241 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 H3BRB1 525 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 LYPLA2O95372 231 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 F2P00734 622 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 GNAT1P11488 350 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 XRCC6P12956 609 aaKnown RBP eCLIP16.68■□□□□ 0.26
ACTB-213ENST00000493945 STAT6P42226 847 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 GJA8P48165 433 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 PRKCEQ02156 737 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 CYP4A11Q02928 519 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 RRAGBQ5VZM2 374 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 RESP18Q5W5W9 173 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 LHX8Q68G74 356 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 CCDC60Q8IWA6 550 aaPredicted RBP16.68■□□□□ 0.26
ACTB-213ENST00000493945 CEP57L1Q8IYX8 460 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 BANK1Q8NDB2 785 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 DYDC2Q96IM9 177 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 CLIC6Q96NY7 704 aa16.68■□□□□ 0.26
ACTB-213ENST00000493945 TUT1Q9H6E5 874 aaKnown RBP16.68■□□□□ 0.26
ACTB-213ENST00000493945 MAFBQ9Y5Q3 323 aaPredicted RBP16.68■□□□□ 0.26
ACTB-213ENST00000493945 COL1A2P08123 1366 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 EML1O00423 815 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 HBP1O60381 514 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 MBD3O95983 291 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 OATP04181 439 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 ASGR1P07306 291 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 PURAQ00577 322 aaKnown RBP16.67■□□□□ 0.26
ACTB-213ENST00000493945 BEX3Q00994 111 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 IL17AQ16552 155 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 HYIQ5T013 277 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 AXDND1Q5T1B0 1012 aaPredicted RBP16.67■□□□□ 0.26
ACTB-213ENST00000493945 ATP8B4Q8TF62 1192 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 HSD17B14Q9BPX1 270 aa16.67■□□□□ 0.26
ACTB-213ENST00000493945 SEPT9Q9UHD8 586 aaPredicted RBP16.67■□□□□ 0.26
ACTB-213ENST00000493945 KCNH3Q9ULD8 1083 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms