RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ST3GAL1Q11201 340 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 ADGRE1Q14246 886 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 IQSEC1Q6DN90 963 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 PSRC1Q6PGN9 363 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-210ENST00000493727 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 STAG2Q8N3U4 1231 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 GAS2L1Q99501 681 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-210ENST00000493727 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
UPF3A-210ENST00000493727 SLC26A6Q9BXS9 759 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 AP5M1Q9H0R1 490 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 PRDM12Q9H4Q4 367 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 CYP39A1Q9NYL5 469 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 THEGQ9P2T0 379 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 Q9Y3F1 56 aa13.94□□□□□ -0.18
UPF3A-210ENST00000493727 TCF20Q9UGU0 1960 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 PALM3A6NDB9 673 aaPredicted RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 CD4P01730 458 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 SSRP1Q08945 709 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 PKDCCQ504Y2 493 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 VASH1Q7L8A9 365 aaPredicted RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 TLK2Q86UE8 772 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 FAM184AQ8NB25 1140 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 MORC4Q8TE76 937 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 HPS1Q92902 700 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 PHKBQ93100 1093 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 INTS4Q96HW7 963 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 GNEQ9Y223 722 aaKnown RBP13.93□□□□□ -0.18
UPF3A-210ENST00000493727 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
UPF3A-210ENST00000493727 BRWD1Q9NSI6 2320 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 JAK2O60674 1132 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 ACRP10323 421 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 IFNAR1P17181 557 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 GJB2P29033 226 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 FSCN1Q16658 493 aaKnown RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 MUM1L1Q5H9M0 696 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 TTBK2Q6IQ55 1244 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 PIBF1Q8WXW3 757 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 HERVK_113Q902F9 699 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 ASB2Q96Q27 587 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 UBA5Q9GZZ9 404 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 VAT1LQ9HCJ6 419 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 CXXC1Q9P0U4 656 aaPredicted RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 ORC3Q9UBD5 711 aaPredicted RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 SEC63Q9UGP8 760 aaKnown RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 RAPGEFL1Q9UHV5 662 aa13.92□□□□□ -0.18
UPF3A-210ENST00000493727 CDV3Q9UKY7 258 aaKnown RBP13.92□□□□□ -0.18
UPF3A-210ENST00000493727 ASTN1O14525 1302 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.91□□□□□ -0.18
UPF3A-210ENST00000493727 DTNBO60941 627 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 SLC16A2P36021 539 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 SNAP25P60880 206 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 SLC43A3Q8NBI5 491 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 ADAMTS19Q8TE59 1207 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 SPZ1Q9BXG8 430 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 CPVLQ9H3G5 476 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 IL23AQ9NPF7 189 aa13.91□□□□□ -0.18
UPF3A-210ENST00000493727 STK36Q9NRP7 1315 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 B4DLN1 442 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 LCE2BO14633 110 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 DEXIO95424 95 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 CYP2C18P33260 490 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 ALDH5A1P51649 535 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 BEX3Q00994 111 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 VAC14Q08AM6 782 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 NR5A1Q13285 461 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 RAB30Q15771 203 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 NTRK3Q16288 839 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 TAPT1Q6NXT6 567 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 Q6ZNB5 142 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 WASF1Q92558 559 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 MAF1Q9H063 256 aa13.9□□□□□ -0.18
UPF3A-210ENST00000493727 MTIF3Q9H2K0 278 aaKnown RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 YBX2Q9Y2T7 364 aaKnown RBP13.9□□□□□ -0.18
UPF3A-210ENST00000493727 UMODL1Q5DID0 1318 aa13.9□□□□□ -0.19
UPF3A-210ENST00000493727 hCG_1642624A0A1W2PR95 340 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms