RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 C1orf186Q6ZWK4 172 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 TPH2Q8IWU9 490 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 NELFCDQ8IXH7 590 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 PDCL2Q8N4E4 241 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 SYTL5Q8TDW5 730 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 PICK1Q9NRD5 415 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 TYW1Q9NV66 732 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ASTN2O75129 1339 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 PARP14Q460N5 1801 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ALAS1P13196 640 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ITGB5P18084 799 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 RPL13P26373 211 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ARHGAP25P42331 645 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 KLK7P49862 253 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ADAM9Q13443 819 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 CTTNQ14247 550 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 STXBP4Q6ZWJ1 553 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 FRMD5Q7Z6J6 570 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 MNS1Q8NEH6 495 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 JADE2Q9NQC1 790 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 COL20A1Q9P218 1284 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 EFCAB8A8MWE9 144 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 SLC16A3O15427 465 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 ZNF131P52739 623 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 UBXN2AP68543 259 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 RAD51AP2Q09MP3 1159 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 NEK11Q8NG66 645 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 RAVER2Q9HCJ3 691 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 CHMP2AO43633 222 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 FAM13AO94988 1023 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 PTPRAP18433 802 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 NOL9Q5SY16 702 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 PARVGQ9HBI0 331 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 METTL14Q9HCE5 456 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 KCNH7Q9NS40 1196 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 TBC1D22BQ9NU19 505 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 GPRC5DQ9NZD1 345 aa11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 SCAF8Q9UPN6 1271 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 REXO2Q9Y3B8 237 aaKnown RBP11.91□□□□□ -0.5
PHACTR4-204ENST00000493669 VWA5AO00534 786 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 NR2F2P24468 414 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 CASP5P51878 434 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 SPP2Q13103 211 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 ANGEL2Q5VTE6 544 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 CPXCR1Q8N123 301 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 GPC2Q8N158 579 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 WRNIP1Q96S55 665 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 CEP72Q9P209 647 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 CTAGE9A4FU28 777 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 LYPLA2O95372 231 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 P4HBP07237 508 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 ZNF569Q5MCW4 686 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 LXNQ9BS40 222 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 TSGA10Q9BZW7 698 aa11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 AGO4Q9HCK5 861 aaKnown RBP11.9□□□□□ -0.5
PHACTR4-204ENST00000493669 TADA3O75528 432 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 MYBP10242 640 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 TUBB4BP68371 445 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 MIER3Q7Z3K6 550 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 DBR1Q9UK59 544 aaKnown RBP11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 ADAMTS5Q9UNA0 930 aa11.9□□□□□ -0.51
PHACTR4-204ENST00000493669 MYPNQ86TC9 1320 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 DHX15O43143 795 aaKnown RBP11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 KRT86O43790 486 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 GCNT3O95395 438 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 LCA5LO95447 670 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 HOXD13P35453 343 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 HERVK_113P62684 666 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 RPS6P62753 249 aaKnown RBP11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 PDXDC1Q6P996 788 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 BAP1Q92560 729 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 CCDC42Q96M95 316 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 NAPGQ99747 312 aaPredicted RBP11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 PHIPQ8WWQ0 1821 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 ARHGEF35A5YM69 484 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 RSPH10B2B2RC85 870 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 RSPH10BP0C881 870 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms