RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ATAD3AQ9NVI7 634 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 KRT86O43790 486 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ADCY3O60266 1144 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ITGB3BPQ13352 177 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 LRRC8BQ6P9F7 803 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ZNF790Q6PG37 636 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 NEK10Q6ZWH5 1172 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 SPATA24Q86W54 205 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 OR2W6PQ8NHA6 318 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 NACAP1Q9BZK3 213 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC68Q9H2F9 335 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 EPB41L5Q9HCM4 733 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 DDX21Q9NR30 783 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 WWC3Q9ULE0 1092 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 SLC4A7Q9Y6M7 1214 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 COMMD3-BMI1R4GMX3 469 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ANKRD31Q8N7Z5 1873 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TSPY2A6NKD2 308 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TTLL13PA6NNM8 815 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TBCAO75347 108 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ANXA1P04083 346 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TSPY3P0CV98 308 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TSPY8P0CW00 308 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ENDOUP21128 410 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 MARCKSP29966 332 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TSPY1Q01534 308 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 KIF5AQ12840 1032 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC110Q8TBZ0 833 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 PRPF31Q8WWY3 499 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 NELFBQ8WX92 580 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 PTPRN2Q92932 1015 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 LSG1Q9H089 658 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ETNK1Q9HBU6 452 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ATRNO75882 1429 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 TLDC2A0PJX2 215 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 YEATS4O95619 227 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 GNAI2P04899 355 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 LDHCP07864 332 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 CALB2P22676 271 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 CCT6AP40227 531 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 USP11P51784 963 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 MAGOHP61326 146 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 AMPD2Q01433 879 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 SLC39A6Q13433 755 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ADALQ6DHV7 355 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 NUTM2AQ8IVF1 878 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 MDM1Q8TC05 714 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 PPP2R3CQ969Q6 453 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 MAGOHBQ96A72 148 aaKnown RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 NACC2Q96BF6 587 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 SNX27Q96L92 541 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 ZSWIM6Q9HCJ5 1215 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 AGAP1Q9UPQ3 857 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 LRCH1Q9Y2L9 728 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 GREB1LQ9C091 1923 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-205ENST00000493587 PSME4Q14997 1843 aa7.44□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC88AQ3V6T2 1871 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 NBPF26B4DH59 902 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SPTLC2O15270 562 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 S100BP04271 92 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CXCR5P32302 372 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 STX17P56962 302 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 NCALDP61601 193 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 GSTM4Q03013 218 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 ITIH3Q06033 890 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CLPPQ16740 277 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 USH1GQ495M9 461 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 OR52E8Q6IFG1 317 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC174Q6PII3 467 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 ANO5Q75V66 913 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 NSUN7Q8NE18 718 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 LRRC8CQ8TDW0 803 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DQX1Q8TE96 717 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC127Q96BQ5 260 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 XPO6Q96QU8 1125 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SPZ1Q9BXG8 430 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RAB17Q9H0T7 212 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RNPEPL1Q9HAU8 725 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 INIPQ9NRY2 104 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 INTS13Q9NVM9 706 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DDX18Q9NVP1 670 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 TFR2Q9UP52 801 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 TEX33O43247 280 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 PDGFRBP09619 1106 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 PLCG2P16885 1265 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 S100A1P23297 94 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 IL4RP24394 825 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 HPCAP84074 193 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 PTH1RQ03431 593 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 COL9A3Q14050 684 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 VSIG1Q86XK7 387 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SLC7A5P1Q8MH63 180 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 ZNF496Q96IT1 587 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DCAF5Q96JK2 942 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SPATA16Q9BXB7 569 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms