RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 PSMC6P62333 389 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 PDIA5Q14554 519 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 PDXDC2PQ6P474 469 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 B3GNT9Q6UX72 402 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 CABP7Q86V35 215 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 TNS4Q8IZW8 715 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 IGSF22Q8N9C0 903 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 PCSK9Q8NBP7 692 aaKnown RBP17.68■□□□□ 0.42
HPS4-216ENST00000493455 SYMPKQ92797 1274 aaKnown RBP17.68■□□□□ 0.42
HPS4-216ENST00000493455 EPSTI1Q96J88 318 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 CDK5RAP3Q96JB5 506 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 GBP4Q96PP9 640 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 OGDHLQ9ULD0 1010 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 CENPFP49454 3210 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 A0A087WWV3 80 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 POTEB3A0JP26 581 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 MED24O75448 989 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 UBA7P41226 1012 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 ACLYP53396 1101 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 CSPP1Q1MSJ5 1256 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 POTEBQ6S5H4 581 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 USP49Q70CQ1 688 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 KLHDC9Q8NEP7 349 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 RDM1Q8NG50 284 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 ABHD8Q96I13 439 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 PCYT2Q99447 389 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 LXNQ9BS40 222 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 PANK2Q9BZ23 570 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 SMARCAD1Q9H4L7 1026 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
HPS4-216ENST00000493455 KAT6AQ92794 2004 aa17.67■□□□□ 0.42
HPS4-216ENST00000493455 CCDC85CA6NKD9 419 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 ATG7O95352 703 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 P4HBP07237 508 aaKnown RBP17.66■□□□□ 0.42
HPS4-216ENST00000493455 CST5P28325 142 aaPredicted RBP17.66■□□□□ 0.42
HPS4-216ENST00000493455 TXLNAP40222 546 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 GJA8P48165 433 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
HPS4-216ENST00000493455 POTEGQ6S5H5 508 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 DIS3LQ8TF46 1054 aaKnown RBP17.66■□□□□ 0.42
HPS4-216ENST00000493455 ATP6V0A1Q93050 837 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 AK8Q96MA6 479 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
HPS4-216ENST00000493455 TRPC6Q9Y210 931 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 EMSYQ7Z589 1322 aa17.66■□□□□ 0.42
HPS4-216ENST00000493455 KIAA0100Q14667 2235 aaKnown RBP17.66■□□□□ 0.42
HPS4-216ENST00000493455 H3BRB1 525 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 DNM1LO00429 736 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 PRPF40AO75400 957 aaKnown RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 LGR5O75473 907 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 QARSP47897 775 aaKnown RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 PSEN2P49810 448 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 SOX10P56693 466 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 PSMC5P62195 406 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 PRKCEQ02156 737 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 MFSD10Q14728 455 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 KIAA0753Q2KHM9 967 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 AXDND1Q5T1B0 1012 aaPredicted RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 SHC4Q6S5L8 630 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 CATSPER3Q86XQ3 398 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 PDILTQ8N807 584 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 NEK9Q8TD19 979 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 CALML4Q96GE6 196 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 CCDC43Q96MW1 224 aaKnown RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 C16orf70Q9BSU1 422 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 CRISPLD2Q9H0B8 497 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 TUT1Q9H6E5 874 aaKnown RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 ERAP1Q9NZ08 941 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 SEPT9Q9UHD8 586 aaPredicted RBP17.65■□□□□ 0.42
HPS4-216ENST00000493455 IGSF9BQ9UPX0 1349 aa17.65■□□□□ 0.42
HPS4-216ENST00000493455 ARID2Q68CP9 1835 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 IGKV6D-21A0A0A0MT36 114 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 A0A1W2PQ45 241 aaPredicted RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 A0A1W2PQY0 241 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 TMEM150BA6NC51 233 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 MOXD2PA6NHM9 499 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 KPNA6O60684 536 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 SLITRK3O94933 977 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 EN2P19622 333 aaPredicted RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 IGBP1P78318 339 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 CCSAPQ6IQ19 270 aaPredicted RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 KAT2BQ92831 832 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 GLT1D1Q96MS3 346 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 SH2D3AQ9BRG2 576 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 MMTAG2Q9BU76 263 aaKnown RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 SENP6Q9GZR1 1112 aaPredicted RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 TUFT1Q9NNX1 390 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 STARD7Q9NQZ5 370 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 FAM13BQ9NYF5 915 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 WRAP73Q9P2S5 460 aaPredicted RBP17.64■□□□□ 0.41
HPS4-216ENST00000493455 CCDC39Q9UFE4 941 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 STK24Q9Y6E0 443 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 MORC2Q9Y6X9 1032 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms