RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CCNE2O96020 404 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 P4HBP07237 508 aaKnown RBP15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 TPM2P07951 284 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 SP2Q02086 613 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 SP3Q02447 781 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 ISM2Q6H9L7 571 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 MAMDC4Q6UXC1 1216 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 SMAP1Q8IYB5 467 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 CD99L2Q8TCZ2 262 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 MAML3Q96JK9 1138 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 C7orf25Q9BPX7 421 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 LXNQ9BS40 222 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 TRIM9Q9C026 710 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 DNAJC25Q9H1X3 360 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 FKTNO75072 461 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 PLA2G4BP0C869 781 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 UBA1P22314 1058 aaKnown RBP15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 CTGFP29279 349 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 MAP2K5Q13163 448 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 NEDD9Q14511 834 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 DPCR1Q3MIW9 517 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 CYFIP1Q7L576 1253 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 FBXO16Q8IX29 292 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 BANK1Q8NDB2 785 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 RMND1Q9NWS8 449 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 PCDHA10Q9Y5I2 948 aa15.72■□□□□ 0.11
PDZRN3-210ENST00000492909 MYH9P35579 1960 aaKnown RBP15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 TNPO2O14787 897 aaKnown RBP15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 RPN1P04843 607 aaKnown RBP15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 PSMC6P62333 389 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 ASIC1P78348 528 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 MORC3Q14149 939 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 FAM200AQ8TCP9 573 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 ZSWIM4Q9H7M6 989 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 VTA1Q9NP79 307 aa15.71■□□□□ 0.11
PDZRN3-210ENST00000492909 MYMKA6NI61 221 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 EYA4O95677 639 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 QARSP47897 775 aaKnown RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 ZNF165P49910 485 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 TERF1P54274 439 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 C11orf57Q6ZUT1 292 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 MSL3Q8N5Y2 521 aaKnown RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 NPLOC4Q8TAT6 608 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SCFD2Q8WU76 684 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SOCS4Q8WXH5 440 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 BMP2KQ9NSY1 1161 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 DDX41Q9UJV9 622 aaKnown RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SYNGAP1Q96PV0 1343 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 PSAPP07602 524 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 HOXC6P09630 235 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SLC12A3P55017 1021 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 ACTR2P61160 394 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SP4Q02446 784 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 TTLL4Q14679 1199 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 KCNB1Q14721 858 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SYT2Q8N9I0 419 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 DDX12PQ92771 950 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 TINF2Q9BSI4 451 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 BHMT2Q9H2M3 363 aa15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 WRAP73Q9P2S5 460 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-210ENST00000492909 SORBS3O60504 671 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 FARP2O94887 1054 aaPredicted RBP15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 LYPLA2O95372 231 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 ARIH2O95376 493 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 GGPS1O95749 300 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 PTMAP06454 111 aaKnown RBP15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 BMP6P22004 513 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 RGS2P41220 211 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 PSMC5P62195 406 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 LY6KQ17RY6 165 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 CCDC62Q6P9F0 684 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 METTL7BQ6UX53 244 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 MLKLQ8NB16 471 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 PIGOQ8TEQ8 1089 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 USP6NLQ92738 828 aa15.69■□□□□ 0.1
PDZRN3-210ENST00000492909 KLRC4O43908 158 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 SNAI1O95863 264 aaPredicted RBP15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 TXNP10599 105 aaKnown RBP15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 CYP11B2P19099 503 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 PSMC4P43686 418 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 FCGRTP55899 365 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 KMT5BQ4FZB7 885 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 MIS18BP1Q6P0N0 1132 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 ABHD15Q6UXT9 468 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 DYMQ7RTS9 669 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 C4orf19Q8IY42 314 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 ATP6V0A1Q93050 837 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 ABHD16BQ9H3Z7 469 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms