RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 HSD17B4P51659 736 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 BTG3Q14201 252 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 CLUL1Q15846 466 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 STOX1Q6ZVD7 989 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 RNF135Q8IUD6 432 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 EDAQ92838 391 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 SNX27Q96L92 541 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 IRF2BPLQ9H1B7 796 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 MUTYHQ9UIF7 546 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 CD207Q9UJ71 328 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 TANC1Q9C0D5 1861 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 TET1Q8NFU7 2136 aa11.29□□□□□ -0.6
TNFRSF9-203ENST00000492571 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 ZBTB5O15062 677 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 MBTPS2O43462 519 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 STAM2O75886 525 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 LGALS2P05162 132 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 PGM5Q15124 567 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 IFIT1BQ5T764 474 aaKnown RBP11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 BMP8AQ7Z5Y6 402 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 KRT23Q9C075 422 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 SETD4Q9NVD3 440 aa11.28□□□□□ -0.6
TNFRSF9-203ENST00000492571 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 LTBRP36941 435 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 PDE1AP54750 535 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 HYAL1Q12794 435 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 NMIQ13287 307 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 HIC1Q14526 733 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 METTL7BQ6UX53 244 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 ADGRA3Q8IWK6 1321 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 TRIP12Q14669 1992 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF9-203ENST00000492571 TMEM221A6NGB7 291 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 B4E1Z4 1266 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 M0R296 226 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 GRM6O15303 877 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 CSPG5O95196 566 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 SP2Q02086 613 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 GHRHRQ02643 423 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 FAM26DQ5JW98 314 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 CYFIP1Q7L576 1253 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 ENAHQ8N8S7 591 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 GIMAP8Q8ND71 665 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 TNPO1Q92973 898 aaKnown RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 ZSWIM5Q9P217 1185 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 NEDD4P46934 1319 aa11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 COL4A4P53420 1690 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-203ENST00000492571 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 ENPP3O14638 875 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 FIBPO43427 364 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 MMP1P03956 469 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 STAG3L1P0CL83 205 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 GHRP10912 638 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 HOXC8P31273 242 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 DLX2Q07687 328 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 TRDNQ13061 729 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 ADAM15Q13444 863 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 NLRX1Q86UT6 975 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 MICAL1Q8TDZ2 1067 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 P2RX5Q93086 422 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 PRKD2Q9BZL6 878 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 DIAPH3Q9NSV4 1193 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 LCTP09848 1927 aa11.25□□□□□ -0.61
TNFRSF9-203ENST00000492571 ERICH2A1L162 156 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 FSD2A1L4K1 749 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 SPATA31C2B4DYI2 1134 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 M0QZ92 97 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 HIP1O00291 1037 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 SDSP20132 328 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms