RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 YME1L1Q96TA2 773 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 FTHL17Q9BXU8 183 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 IFIH1Q9BYX4 1025 aaKnown RBP9.99□□□□□ -0.81
NUP50-217ENST00000491860 KCNH7Q9NS40 1196 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 TCEAL9Q9UHQ7 104 aa9.99□□□□□ -0.81
NUP50-217ENST00000491860 GSTTP1A0A1W2PQM5 241 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 ESYT2A0FGR8 921 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 LINC01553A4QN01 128 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 PI4K2BG5E9Z4 385 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 STXBP3O00186 592 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 ATP9AO75110 1047 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 CTSHP09668 335 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 GNA11P29992 359 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 SREBF1P36956 1147 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 SETQ01105 290 aaPredicted RBP9.98□□□□□ -0.81
NUP50-217ENST00000491860 ODR4Q5SWX8 454 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 FAM160B1Q5W0V3 765 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 BLOC1S2Q6QNY1 142 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 TRIM50Q86XT4 487 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 CCDC148Q8NFR7 591 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 KCNB2Q92953 911 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 ANO3Q9BYT9 981 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 BCAS3Q9H6U6 928 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 CERS4Q9HA82 394 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 C6orf50Q9HD87 102 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
NUP50-217ENST00000491860 COL4A4P53420 1690 aaPredicted RBP9.98□□□□□ -0.81
NUP50-217ENST00000491860 NID2Q14112 1375 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 RALGAPA2Q2PPJ7 1873 aa9.98□□□□□ -0.81
NUP50-217ENST00000491860 hCG_1642624A0A1W2PR95 340 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 LCHNA4D1U4 455 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 EPOPA6NHQ4 379 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 RFXAPO00287 272 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 MEIS1O00470 390 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 NCK2O43639 380 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 RB1P06400 928 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 SCG2P13521 617 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
NUP50-217ENST00000491860 STAT5BP51692 787 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 FUT2Q10981 343 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 PFKFB3Q16875 520 aaPredicted RBP9.97□□□□□ -0.81
NUP50-217ENST00000491860 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
NUP50-217ENST00000491860 TIGD5Q53EQ6 642 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.97□□□□□ -0.81
NUP50-217ENST00000491860 TSHZ1Q6ZSZ6 1077 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 FAM177A1Q8N128 213 aaPredicted RBP9.97□□□□□ -0.81
NUP50-217ENST00000491860 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.811e-7■□□□□ 8.2
NUP50-217ENST00000491860 CCDC136Q96JN2 1154 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 SUGCTQ9HAC7 445 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 TBC1D22BQ9NU19 505 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 NAP1L2Q9ULW6 460 aaPredicted RBP9.97□□□□□ -0.81
NUP50-217ENST00000491860 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 PCDHA2Q9Y5H9 948 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 COL1A2P08123 1366 aa9.97□□□□□ -0.81
NUP50-217ENST00000491860 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 PRPF3O43395 683 aaKnown RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 HBP1O60381 514 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 LPXNO60711 386 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 ATG7O95352 703 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 CHRNA1P02708 482 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 CYP3A4P08684 503 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 HSPA4P34932 840 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 ACTR2P61160 394 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 MRPS6P82932 125 aaKnown RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 MGAT3Q09327 533 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 ADCK5Q3MIX3 580 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 MIS18BP1Q6P0N0 1132 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 Q6ZUG5 572 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 RAB11FIP4Q86YS3 637 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 SMAP1Q8IYB5 467 aaPredicted RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 FIBCD1Q8N539 461 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 GDPD5Q8WTR4 605 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 MRPL38Q96DV4 380 aaKnown RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 IL17RAQ96F46 866 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 JAKMIP1Q96N16 626 aaKnown RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 RNF26Q9BY78 433 aaPredicted RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 ZMYND12Q9H0C1 365 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 LMAN2LQ9H0V9 348 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 AGO4Q9HCK5 861 aaKnown RBP9.96□□□□□ -0.82
NUP50-217ENST00000491860 BRPF3Q9ULD4 1205 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 NLRC5Q86WI3 1866 aa9.96□□□□□ -0.82
NUP50-217ENST00000491860 MYH9P35579 1960 aaKnown RBP9.95□□□□□ -0.82
NUP50-217ENST00000491860 TTC3P53804 2025 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 MUC6Q6W4X9 2439 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 SMIM35A0A1B0GVV1 85 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.95□□□□□ -0.82
NUP50-217ENST00000491860 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 H3BNC9 293 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 ARHGEF15O94989 841 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 UPP2O95045 317 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 STAG3L1P0CL83 205 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 INSRRP14616 1297 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 RPS6KB1P23443 525 aa9.95□□□□□ -0.82
NUP50-217ENST00000491860 MARK3P27448 753 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms