RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PLEKHG4Q58EX7 1191 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 DBF4BQ8NFT6 615 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 EHMT1Q9H9B1 1298 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 CERS4Q9HA82 394 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 PRDM6Q9NQX0 595 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 ERAP1Q9NZ08 941 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 SLC9A2Q9UBY0 812 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 SIP14410 1827 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 EMSYQ7Z589 1322 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 MBLAC1A4D2B0 266 aaPredicted RBP14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 CHRNA1P02708 482 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 PPFIA1Q13136 1202 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 ANKRD1Q15327 319 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 FAM26DQ5JW98 314 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 NIPA1Q7RTP0 329 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 RASGRP4Q8TDF6 673 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 GLG1Q92896 1179 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 IL17RAQ96F46 866 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 UIMC1Q96RL1 719 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 SLC26A6Q9BXS9 759 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 RNF26Q9BY78 433 aaPredicted RBP14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 GLT8D2Q9H1C3 349 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 SMARCAD1Q9H4L7 1026 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 VPS54Q9P1Q0 977 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 BDP1A6H8Y1 2624 aa14.46□□□□□ -0.09
SEC61A1-206ENST00000491668 PRRC2BQ5JSZ5 2229 aaKnown RBP14.46□□□□□ -0.1
SEC61A1-206ENST00000491668 MUC3AQ02505 3323 aa14.46□□□□□ -0.1
SEC61A1-206ENST00000491668 MICAL3Q7RTP6 2002 aa14.46□□□□□ -0.1
SEC61A1-206ENST00000491668 IGKV6D-21A0A0A0MT36 114 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 ST18O60284 1047 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 CAND2O75155 1236 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 ATG7O95352 703 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 GJB5O95377 273 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 GNAT1P11488 350 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 KCNJ6P48051 423 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 IKBKEQ14164 716 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 GRIK4Q16099 956 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 REXO1Q8N1G1 1221 aaKnown RBP14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 KAT6AQ92794 2004 aa14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 GAS2L1Q99501 681 aaPredicted RBP14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 COL25A1Q9BXS0 654 aaPredicted RBP14.45□□□□□ -0.1
SEC61A1-206ENST00000491668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 TLL1O43897 1013 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 INSRRP14616 1297 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 MGAT3Q09327 533 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 PLCB4Q15147 1175 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 NPY5RQ15761 445 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 ABHD15Q6UXT9 468 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 PLA2G4DQ86XP0 818 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 TRAPPC12Q8WVT3 735 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 LENG9Q96B70 501 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 KIF2CQ99661 725 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 SDF4Q9BRK5 362 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 C6orf50Q9HD87 102 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 TUBE1Q9UJT0 475 aa14.44□□□□□ -0.1
SEC61A1-206ENST00000491668 DDX39AO00148 427 aaKnown RBP14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 LPXNO60711 386 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 DTNBO60941 627 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 ATP4AP20648 1035 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 IGFBP4P22692 258 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 CIITAP33076 1130 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 AK2P54819 239 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 IGBP1P78318 339 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 CCDC85BQ15834 202 aaPredicted RBP14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 KRT40Q6A162 431 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 FAM117BQ6P1L5 589 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 TAF2Q6P1X5 1199 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 IL27Q8NEV9 243 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 DNAJB3Q8WWF6 145 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 PPM1EQ8WY54 764 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 ARNTL2Q8WYA1 636 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 AIFM3Q96NN9 605 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 RAD9AQ99638 391 aa14.43□□□□□ -0.1
SEC61A1-206ENST00000491668 KIF28PB7ZC32 967 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 M0R2N6 131 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 IPO5O00410 1097 aaKnown RBP14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 EFCAB14O75071 495 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 POU3F3P20264 500 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 GNA11P29992 359 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 ZNF76P36508 570 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 STAT5BP51692 787 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 HTRA4P83105 476 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 LPIN1Q14693 890 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 CCDC60Q8IWA6 550 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 SEPT8Q92599 483 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 MTCH2Q9Y6C9 303 aa14.42□□□□□ -0.1
SEC61A1-206ENST00000491668 LINC01553A4QN01 128 aa14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 ZBTB42B2RXF5 422 aa14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 AKAP17AQ02040 695 aaKnown RBP14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 STK3Q13188 491 aa14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 PRR16Q569H4 304 aa14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 IFIH1Q9BYX4 1025 aaKnown RBP14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 FAM49AQ9H0Q0 323 aaPredicted RBP14.41□□□□□ -0.1
SEC61A1-206ENST00000491668 AZI2Q9H6S1 392 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms