RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TAF2Q6P1X5 1199 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 PLPPR4Q7Z2D5 763 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 DAGLBQ8NCG7 672 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 MYLIPQ8WY64 445 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 PCYT2Q99447 389 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 SLC28A3Q9HAS3 691 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 TBC1D22BQ9NU19 505 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 YBX2Q9Y2T7 364 aaKnown RBP17.13■□□□□ 0.33
USP39-217ENST00000491659 MYH9P35579 1960 aaKnown RBP17.13■□□□□ 0.33
USP39-217ENST00000491659 WDR81Q562E7 1941 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 BACH1O14867 736 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 CCNE2O96020 404 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 SLC26A2P50443 739 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 STAT5BP51692 787 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 USP11P51784 963 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 NEK4P51957 841 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 WDR5P61964 334 aaKnown RBP17.12■□□□□ 0.33
USP39-217ENST00000491659 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 PPP2R2DQ66LE6 453 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 RSPH3Q86UC2 560 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 BLIDQ8IZY5 108 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
USP39-217ENST00000491659 RRN3P2A6NIE6 340 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 ATG7O95352 703 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 SEC24BO95487 1268 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 RPLP2P05387 115 aaKnown RBP17.11■□□□□ 0.33
USP39-217ENST00000491659 IGBP1P78318 339 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 KRT76Q01546 638 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 IKBKEQ14164 716 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 PLCB4Q15147 1175 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 HERC6Q8IVU3 1022 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 WASF1Q92558 559 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 UIMC1Q96RL1 719 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 ZNF302Q9NR11 478 aa17.11■□□□□ 0.33
USP39-217ENST00000491659 IGKV6D-21A0A0A0MT36 114 aa17.1■□□□□ 0.33
USP39-217ENST00000491659 MBLAC1A4D2B0 266 aaPredicted RBP17.1■□□□□ 0.33
USP39-217ENST00000491659 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
USP39-217ENST00000491659 INSRRP14616 1297 aa17.1■□□□□ 0.33
USP39-217ENST00000491659 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
USP39-217ENST00000491659 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
USP39-217ENST00000491659 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
USP39-217ENST00000491659 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
USP39-217ENST00000491659 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
USP39-217ENST00000491659 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
USP39-217ENST00000491659 GTF3C6Q969F1 213 aa17.1■□□□□ 0.33
USP39-217ENST00000491659 GAS2L1Q99501 681 aaPredicted RBP17.1■□□□□ 0.33
USP39-217ENST00000491659 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
USP39-217ENST00000491659 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 M0R2N6 131 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 MYOGP15173 224 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 ME3Q16798 604 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 POTEBQ6S5H4 581 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
USP39-217ENST00000491659 DBF4BQ8NFT6 615 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 MAFAQ8NHW3 353 aaPredicted RBP17.09■□□□□ 0.33
USP39-217ENST00000491659 SEPT8Q92599 483 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 LENG9Q96B70 501 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
USP39-217ENST00000491659 COL1A2P08123 1366 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 TLL1O43897 1013 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 LARGE1O95461 756 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 CA3P07451 260 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 PSAPP07602 524 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 DEFB103AP81534 67 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 NPY5RQ15761 445 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 TCTN1Q2MV58 587 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 C8orf34Q49A92 452 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 MARCH8Q5T0T0 291 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 DNAJB3Q8WWF6 145 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 APBB2Q92870 758 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.32
USP39-217ENST00000491659 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 PCDHA10Q9Y5I2 948 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.32
USP39-217ENST00000491659 WDR64B1ANS9 1081 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 M0QZ92 97 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 MSH4O15457 936 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 HBP1O60381 514 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 GAS7O60861 476 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 AMHP03971 560 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 Q4G0T1 1027 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 MOXD1Q6UVY6 613 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms