RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 IGHDP01880 384 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 ITGB1P05556 798 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 BTG3Q14201 252 aaPredicted RBP15.28■□□□□ 0.04
USF1-206ENST00000491629 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 SPPL3Q8TCT6 385 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 DNAJB3Q8WWF6 145 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 SENP7Q9BQF6 1050 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 WDR87Q6ZQQ6 2873 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 KCNA2P16389 499 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 TCF7P36402 384 aaPredicted RBP15.27■□□□□ 0.04
USF1-206ENST00000491629 NUCB1Q02818 461 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 PCNX4Q63HM2 1172 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 BMP8AQ7Z5Y6 402 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 MFSD14AQ96MC6 490 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 PLVAPQ9BX97 442 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 ZNF215Q9UL58 517 aaPredicted RBP15.27■□□□□ 0.04
USF1-206ENST00000491629 RWDD3Q9Y3V2 267 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 CDY2AQ9Y6F7 541 aa15.27■□□□□ 0.04
USF1-206ENST00000491629 LOC730098B7Z3J9 87 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 CYP21A2P08686 494 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 CD52P31358 61 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 GATMP50440 423 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 TCF15Q12870 199 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 GRIK4Q16099 956 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 TAF2Q6P1X5 1199 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 SMRP1Q8NCR6 262 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 P2RX5Q93086 422 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 PCYT2Q99447 389 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
USF1-206ENST00000491629 TUBE1Q9UJT0 475 aa15.26■□□□□ 0.03
USF1-206ENST00000491629 RIF1Q5UIP0 2472 aaKnown RBP15.25■□□□□ 0.03
USF1-206ENST00000491629 TMEM221A6NGB7 291 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 M0R296 226 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 ITGB5P18084 799 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 MARK3P27448 753 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 ANTXR2P58335 489 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 RBM10P98175 930 aaKnown RBP15.25■□□□□ 0.03
USF1-206ENST00000491629 PTH1RQ03431 593 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 COASYQ13057 564 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 CBX2Q14781 532 aaPredicted RBP15.25■□□□□ 0.03
USF1-206ENST00000491629 TSHZ1Q6ZSZ6 1077 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 TRIM67Q6ZTA4 783 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 EFHBQ8N7U6 833 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 KLHL23Q8NBE8 558 aa15.25■□□□□ 0.03
USF1-206ENST00000491629 MYH9P35579 1960 aaKnown RBP15.24■□□□□ 0.03
USF1-206ENST00000491629 PIK3CDO00329 1044 aa15.24■□□□□ 0.03
USF1-206ENST00000491629 IFIT3O14879 490 aaKnown RBP15.24■□□□□ 0.03
USF1-206ENST00000491629 NDUFV1P49821 464 aa15.24■□□□□ 0.03
USF1-206ENST00000491629 MRPS6P82932 125 aaKnown RBP15.24■□□□□ 0.03
USF1-206ENST00000491629 ZXDAP98168 799 aa15.24■□□□□ 0.03
USF1-206ENST00000491629 TRAF1Q13077 416 aa15.24■□□□□ 0.03
USF1-206ENST00000491629 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
USF1-206ENST00000491629 PAN2Q504Q3 1202 aaKnown RBP15.24■□□□□ 0.03
USF1-206ENST00000491629 VN1R2Q8NFZ6 395 aa15.24■□□□□ 0.03
USF1-206ENST00000491629 TMX1Q9H3N1 280 aa15.24■□□□□ 0.03
USF1-206ENST00000491629 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
USF1-206ENST00000491629 PTPRZ1P23471 2315 aaPredicted RBP15.23■□□□□ 0.03
USF1-206ENST00000491629 DCHS1Q96JQ0 3298 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 HIP1O00291 1037 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 NRIP1P48552 1158 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 TMEM62Q0P6H9 643 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 RBM23Q86U06 439 aaKnown RBP15.23■□□□□ 0.03
USF1-206ENST00000491629 CMTR2Q8IYT2 770 aaKnown RBP15.23■□□□□ 0.03
USF1-206ENST00000491629 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 TRAPPC12Q8WVT3 735 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 SEPT1Q8WYJ6 367 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 PBXIP1Q96AQ6 731 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 GPRASP2Q96D09 838 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 MYL10Q9BUA6 226 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 PADI3Q9ULW8 664 aa15.23■□□□□ 0.03
USF1-206ENST00000491629 USP15Q9Y4E8 981 aaPredicted RBP15.23■□□□□ 0.03
USF1-206ENST00000491629 INSRRP14616 1297 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 IGBP1P78318 339 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 WTAPQ15007 396 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 NAALADL2Q58DX5 795 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 XRRA1Q6P2D8 792 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 NPAS4Q8IUM7 802 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 SMARCC2Q8TAQ2 1214 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 SNX27Q96L92 541 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 SPZ1Q9BXG8 430 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 FAM49AQ9H0Q0 323 aaPredicted RBP15.22■□□□□ 0.03
USF1-206ENST00000491629 ERAP1Q9NZ08 941 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 PKD2L1Q9P0L9 805 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 HCSTQ9UBK5 93 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 UBIAD1Q9Y5Z9 338 aa15.22■□□□□ 0.03
USF1-206ENST00000491629 FAM186AA6NE01 2351 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 E7EWF7 191 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 MGEA5O60502 916 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 GSPT1P15170 499 aaKnown RBP15.21■□□□□ 0.03
USF1-206ENST00000491629 VCPP55072 806 aaKnown RBP15.21■□□□□ 0.03
USF1-206ENST00000491629 RSPH3Q86UC2 560 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 NLRX1Q86UT6 975 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
USF1-206ENST00000491629 SUSD6Q92537 303 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 ASIC4Q96FT7 647 aa15.21■□□□□ 0.03
USF1-206ENST00000491629 IGSF9BQ9UPX0 1349 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms