RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	NPAS4	Q8IUM7	802 aa		22.26	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	SENP7	Q9BQF6	1050 aa		22.26	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	KAT6A	Q92794	2004 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PROB1	E7EW31	1015 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334		H0Y858	1186 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	GLP2R	O95838	553 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	RPLP2	P05387	115 aa	Known RBP	22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	GIMAP8	Q8ND71	665 aa	Predicted RBP	22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	DNAJB3	Q8WWF6	145 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	KRT23	Q9C075	422 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	TLR9	Q9NR96	1032 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	CDY2A	Q9Y6F7	541 aa		22.25	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	SP4	Q02446	784 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PPFIA1	Q13136	1202 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	SEMA3F	Q13275	785 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PTPN21	Q16825	1174 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	RTN4RL1	Q86UN2	441 aa	Predicted RBP	22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	HOMER1	Q86YM7	354 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	CRIPAK	Q8N1N5	446 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	MAD2L2	Q9UI95	211 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	TUBE1	Q9UJT0	475 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	SQOR	Q9Y6N5	450 aa		22.24	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PPFIA3	O75145	1194 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	CD52	P31358	61 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	UBE3A	Q05086	875 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PAN2	Q504Q3	1202 aa	Known RBP	22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	IER5	Q5VY09	327 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	ZBTB33	Q86T24	672 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	SUSD6	Q92537	303 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	RILPL2	Q969X0	211 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	RIPOR3	Q96MK2	946 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	NEK1	Q96PY6	1258 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	CDCA3	Q99618	268 aa	Predicted RBP	22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	CNNM2	Q9H8M5	875 aa		22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	AGO3	Q9H9G7	860 aa	Known RBP	22.23	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PALM3	A6NDB9	673 aa	Predicted RBP	22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	TCF7	P36402	384 aa	Predicted RBP	22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	GRIK4	Q16099	956 aa		22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	IMMT	Q16891	758 aa	Known RBP	22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	ATP8B4	Q8TF62	1192 aa		22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PIGS	Q96S52	555 aa		22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	ERAP1	Q9NZ08	941 aa		22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PCDHB12	Q9Y5F1	795 aa		22.22	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	FAM186A	A6NE01	2351 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PNMA6F	A0A0J9YX94	578 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	MBLAC1	A4D2B0	266 aa	Predicted RBP	22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PER2	O15055	1255 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	GALR2	O43603	387 aa	Predicted RBP	22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	MRPS6	P82932	125 aa	Known RBP	22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	PDE12	Q6L8Q7	609 aa	Known RBP	22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	XRRA1	Q6P2D8	792 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	NLRX1	Q86UT6	975 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	LINC01599	Q8WXQ3	324 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	RIOX1	Q9H6W3	641 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	AAAS	Q9NRG9	546 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	LRFN2	Q9ULH4	789 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	TELO2	Q9Y4R8	837 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	FRMPD4	Q14CM0	1322 aa		22.21	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	KMT2E	Q8IZD2	1858 aa		22.2	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SRGAP2B	P0DMP2	458 aa		22.2	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SCG2	P13521	617 aa		22.2	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SDS	P20132	328 aa		22.2	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SEPT1	Q8WYJ6	367 aa		22.2	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	PCDHGC5	Q9Y5F6	944 aa		22.2	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	RRN3P2	A6NIE6	340 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334		M0QZ92	97 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	MARCH8	Q5T0T0	291 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SPOUT1	Q5T280	376 aa	Known RBP	22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	PCNX4	Q63HM2	1172 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	ERMP1	Q7Z2K6	904 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	GLG1	Q92896	1179 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SMARCAD1	Q9H4L7	1026 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	PADI3	Q9ULW8	664 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	TRPC6	Q9Y210	931 aa		22.19	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	MARK3	P27448	753 aa		22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	DUSP6	Q16828	381 aa		22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	FAM43B	Q6ZT52	329 aa	Predicted RBP	22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	ASCL5	Q7RTU5	278 aa		22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	TNPO1	Q92973	898 aa	Known RBP	22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	S1PR5	Q9H228	398 aa		22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	RNF216	Q9NWF9	866 aa	Predicted RBP	22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	PCDHB7	Q9Y5E2	793 aa		22.18	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	IGBP1	P78318	339 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	PAK2	Q13177	524 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SEC23A	Q15436	765 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	TMEM184A	Q6ZMB5	413 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	SMARCC2	Q8TAQ2	1214 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	CUL5	Q93034	780 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	CDHR1	Q96JP9	859 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	DSCC1	Q9BVC3	393 aa		22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	FAM49A	Q9H0Q0	323 aa	Predicted RBP	22.17	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	GSTTP1	A0A1W2PQM5	241 aa		22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	PDGFB	P01127	241 aa	Predicted RBP	22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	NBL1	P41271	181 aa		22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	RBM10	P98175	930 aa	Known RBP	22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	CWC27	Q6UX04	472 aa	Known RBP	22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	UBALD2	Q8IYN6	164 aa		22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	VN1R2	Q8NFZ6	395 aa		22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	TMEM260	Q9NX78	707 aa		22.16	■■□□□ 1.14
CDK5RAP2-218	ENST00000491334	NR2E1	Q9Y466	385 aa		22.16	■■□□□ 1.14

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms