RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 DNAJB3Q8WWF6 145 aa23.75■■□□□ 1.39
CLIP2-208ENST00000491075 RUFY2Q8WXA3 655 aa23.75■■□□□ 1.39
CLIP2-208ENST00000491075 SEPT1Q8WYJ6 367 aa23.75■■□□□ 1.39
CLIP2-208ENST00000491075 MFSD14AQ96MC6 490 aa23.75■■□□□ 1.39
CLIP2-208ENST00000491075 SEC63Q9UGP8 760 aaKnown RBP23.75■■□□□ 1.39
CLIP2-208ENST00000491075 CDY2AQ9Y6F7 541 aa23.75■■□□□ 1.39
CLIP2-208ENST00000491075 E7EWF7 191 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 MARK3P27448 753 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 KIF5BP33176 963 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 NAALADL2Q58DX5 795 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 CMTR2Q8IYT2 770 aaKnown RBP23.74■■□□□ 1.39
CLIP2-208ENST00000491075 CTCFLQ8NI51 663 aaPredicted RBP23.74■■□□□ 1.39
CLIP2-208ENST00000491075 GLG1Q92896 1179 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 MUTYHQ9UIF7 546 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 PLAGL2Q9UPG8 496 aa23.74■■□□□ 1.39
CLIP2-208ENST00000491075 GSTTP1A0A1W2PQM5 241 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 ATP9AO75110 1047 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 SMARCA1P28370 1054 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 GTF2F1P35269 517 aaKnown RBP eCLIP23.73■■□□□ 1.39
CLIP2-208ENST00000491075 MRPS6P82932 125 aaKnown RBP23.73■■□□□ 1.39
CLIP2-208ENST00000491075 ADAM15Q13444 863 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 MARCH8Q5T0T0 291 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 RNF135Q8IUD6 432 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 FTHL17Q9BXU8 183 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 SMARCAD1Q9H4L7 1026 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 IGFLR1Q9H665 355 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 ALG13Q9NP73 1137 aaKnown RBP23.73■■□□□ 1.39
CLIP2-208ENST00000491075 SQORQ9Y6N5 450 aa23.73■■□□□ 1.39
CLIP2-208ENST00000491075 STXBP3O00186 592 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 LINC01565O15544 149 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 DDAH1O94760 285 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 CSPG5O95196 566 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 NDUFV1P49821 464 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 PTH1RQ03431 593 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 CAMK1Q14012 370 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 ZNF654Q8IZM8 581 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 IGDCC4Q8TDY8 1250 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 LINC01599Q8WXQ3 324 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 LZTS2Q9BRK4 669 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 MRPL42Q9Y6G3 142 aaKnown RBP23.72■■□□□ 1.39
CLIP2-208ENST00000491075 TAF6LQ9Y6J9 622 aa23.72■■□□□ 1.39
CLIP2-208ENST00000491075 TECTAO75443 2155 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 PLXNA4Q9HCM2 1894 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 RRN3P2A6NIE6 340 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 ITGB5P18084 799 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 CD52P31358 61 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 ANTXR2P58335 489 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 MTMR1Q13613 665 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 IER5Q5VY09 327 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 NPAS4Q8IUM7 802 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 MSLNLQ96KJ4 702 aa23.71■■□□□ 1.39
CLIP2-208ENST00000491075 AGO3Q9H9G7 860 aaKnown RBP23.71■■□□□ 1.39
CLIP2-208ENST00000491075 M0QZ92 97 aa23.7■■□□□ 1.38
CLIP2-208ENST00000491075 EYA4O95677 639 aa23.7■■□□□ 1.38
CLIP2-208ENST00000491075 GSPT1P15170 499 aaKnown RBP23.7■■□□□ 1.38
CLIP2-208ENST00000491075 IGBP1P78318 339 aa23.7■■□□□ 1.38
CLIP2-208ENST00000491075 TTC22Q5TAA0 569 aa23.7■■□□□ 1.38
CLIP2-208ENST00000491075 MB21D2Q8IYB1 491 aaPredicted RBP23.7■■□□□ 1.38
CLIP2-208ENST00000491075 CRIPAKQ8N1N5 446 aa23.7■■□□□ 1.38
CLIP2-208ENST00000491075 PSTPIP2Q9H939 334 aa23.7■■□□□ 1.38
CLIP2-208ENST00000491075 ITGB1P05556 798 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 STAG3L1P0CL83 205 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 GNAQP50148 359 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 EFHBQ8N7U6 833 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 EDAQ92838 391 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 TNPO1Q92973 898 aaKnown RBP23.69■■□□□ 1.38
CLIP2-208ENST00000491075 MYL10Q9BUA6 226 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 FAM49AQ9H0Q0 323 aaPredicted RBP23.69■■□□□ 1.38
CLIP2-208ENST00000491075 LY9Q9HBG7 655 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 TRPV2Q9Y5S1 764 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 UBIAD1Q9Y5Z9 338 aa23.69■■□□□ 1.38
CLIP2-208ENST00000491075 MAFGO15525 162 aa23.68■■□□□ 1.38
CLIP2-208ENST00000491075 INSRRP14616 1297 aa23.68■■□□□ 1.38
CLIP2-208ENST00000491075 DNAJB1P25685 340 aa23.68■■□□□ 1.38
CLIP2-208ENST00000491075 SMRP1Q8NCR6 262 aa23.68■■□□□ 1.38
CLIP2-208ENST00000491075 SPPL3Q8TCT6 385 aa23.68■■□□□ 1.38
CLIP2-208ENST00000491075 PKD2L1Q9P0L9 805 aa23.68■■□□□ 1.38
CLIP2-208ENST00000491075 IGSF9BQ9UPX0 1349 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 SPDYE3A6NKU9 549 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 SCG2P13521 617 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 CHMLP26374 656 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 COASYQ13057 564 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 PAK2Q13177 524 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 BMP8AQ7Z5Y6 402 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 ADGRD2Q7Z7M1 963 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 RTN4RL1Q86UN2 441 aaPredicted RBP23.67■■□□□ 1.38
CLIP2-208ENST00000491075 KLHL23Q8NBE8 558 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 MTA3Q9BTC8 594 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 AZI2Q9H6S1 392 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 JPH1Q9HDC5 661 aaPredicted RBP23.67■■□□□ 1.38
CLIP2-208ENST00000491075 JADE2Q9NQC1 790 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 PADI3Q9ULW8 664 aa23.67■■□□□ 1.38
CLIP2-208ENST00000491075 PLEKHA8P1O95397 391 aa23.66■■□□□ 1.38
CLIP2-208ENST00000491075 PAN2Q504Q3 1202 aaKnown RBP23.66■■□□□ 1.38
CLIP2-208ENST00000491075 CASC1Q6TDU7 716 aa23.66■■□□□ 1.38
CLIP2-208ENST00000491075 POF1BQ8WVV4 589 aa23.66■■□□□ 1.38
CLIP2-208ENST00000491075 CLEC1BQ9P126 229 aa23.66■■□□□ 1.38
CLIP2-208ENST00000491075 TRPC6Q9Y210 931 aa23.66■■□□□ 1.38
CLIP2-208ENST00000491075 FNDC1Q4ZHG4 1894 aaPredicted RBP23.66■■□□□ 1.38
CLIP2-208ENST00000491075 UBE2SQ16763 222 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms