RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 SPC25Q9HBM1 224 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 PQBP1O60828 265 aaKnown RBP10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 PLEKHG4Q58EX7 1191 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 JAKMIP3Q5VZ66 844 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 UNC45AQ9H3U1 944 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 NRCAMQ92823 1304 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 CDKL5O76039 1030 aa10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 STK3Q13188 491 aa10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 NR5A1Q13285 461 aa10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 SMAP1Q8IYB5 467 aaPredicted RBP10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 RDM1Q8NG50 284 aa10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 SNX21Q969T3 373 aa10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 FOXP1Q9H334 677 aaPredicted RBP10.46□□□□□ -0.74
SUPT20H-220ENST00000490716 CEP290O15078 2479 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 TREHO43280 583 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 PFKMP08237 780 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 MYL3P08590 195 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 CSF2RAP15509 400 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 SLC26A2P50443 739 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 IL17AQ16552 155 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 FAM43BQ6ZT52 329 aaPredicted RBP10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 SP7Q8TDD2 431 aaPredicted RBP10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 PPP1R13LQ8WUF5 828 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 TMX3Q96JJ7 454 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 EML1O00423 815 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 GPR32O75388 356 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 C22orf31O95567 290 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 FPGSQ05932 587 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 ORC2Q13416 577 aaPredicted RBP10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 PTGISQ16647 500 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 TTYH1Q9H313 450 aaPredicted RBP10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 TBC1D22BQ9NU19 505 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 SQORQ9Y6N5 450 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 DCDC2CA8MYV0 355 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 LYPLA2O95372 231 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 CYP2C18P33260 490 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 KRT40Q6A162 431 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 KCNN1Q92952 543 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 HSD17B14Q9BPX1 270 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 ISY1Q9ULR0 285 aaKnown RBP10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 MYH11P35749 1972 aa10.45□□□□□ -0.74
SUPT20H-220ENST00000490716 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 KRT25Q7Z3Z0 450 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 LINC01599Q8WXQ3 324 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 HIPK3Q9H422 1215 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 CYP2C9P11712 490 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 POU3F3P20264 500 aaPredicted RBP10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 ZNF618Q5T7W0 954 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 GJA10Q969M2 543 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 ADAMTS10Q9H324 1103 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 TMEM39AQ9NV64 488 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 ALG1Q9BT22 464 aa10.44□□□□□ -0.74
SUPT20H-220ENST00000490716 DENND4AQ7Z401 1863 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 GCFC2P16383 781 aaKnown RBP10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 HTRA4P83105 476 aaPredicted RBP10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 SMARCAD1Q9H4L7 1026 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 TCHHQ07283 1943 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 BTBD18B2RXH4 712 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 ARHGEF15O94989 841 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 ERAP1Q9NZ08 941 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 PARNO95453 639 aaKnown RBP10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 SPATA31C1P0DKV0 1188 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 MTHFD1LQ6UB35 978 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 ZNF689Q96CS4 500 aaPredicted RBP10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 FAM20AQ96MK3 541 aa10.43□□□□□ -0.74
SUPT20H-220ENST00000490716 C5orf42Q9H799 3197 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 SMIM35A0A1B0GVV1 85 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 BAIAP3O94812 1187 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 SELPP16109 830 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 DDIT3P35638 169 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■■□□ 14.6
SUPT20H-220ENST00000490716 NONOQ15233 471 aaKnown RBP eCLIP10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 RTN4RL1Q86UN2 441 aaPredicted RBP10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 ATP8B4Q8TF62 1192 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 TMEM60Q9H2L4 133 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 KRT76Q01546 638 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 INF2Q27J81 1249 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 ANO5Q75V66 913 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 POTEDQ86YR6 584 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 TMX1Q9H3N1 280 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 C17orf102A2RUQ5 167 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 DSC3Q14574 896 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 GRIK4Q16099 956 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 LRRC8DQ7L1W4 858 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 CCDC83Q8IWF9 413 aa10.42□□□□□ -0.74
SUPT20H-220ENST00000490716 KIAA0319LQ8IZA0 1049 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms