RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 LPXNO60711 386 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 ITGB5P18084 799 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 CDC27P30260 824 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 ADD1P35611 737 aaKnown RBP11.82□□□□□ -0.52
TTC28-207ENST00000490475 NAPAP54920 295 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 SP4Q02446 784 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
TTC28-207ENST00000490475 HIC1Q14526 733 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 RTN1Q16799 776 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
TTC28-207ENST00000490475 TIGD5Q53EQ6 642 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 IER5Q5VY09 327 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
TTC28-207ENST00000490475 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 AGXT2Q9BYV1 514 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 RIC8AQ9NPQ8 531 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 PDRG1Q9NUG6 133 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 SLC9A2Q9UBY0 812 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
TTC28-207ENST00000490475 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
TTC28-207ENST00000490475 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
TTC28-207ENST00000490475 RALGAPA2Q2PPJ7 1873 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 GOLGA8AA7E2F4 631 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 GOLGA8BA8MQT2 603 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 EIF5BO60841 1220 aaKnown RBP11.81□□□□□ -0.52
TTC28-207ENST00000490475 ARHGEF15O94989 841 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 RB1P06400 928 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 CTSHP09668 335 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 ADCY7P51828 1080 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 ANAPC15P60006 121 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 FUT2Q10981 343 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 GRIK4Q16099 956 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
TTC28-207ENST00000490475 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 PLPPR4Q7Z2D5 763 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 MRPL38Q96DV4 380 aaKnown RBP11.81□□□□□ -0.52
TTC28-207ENST00000490475 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 FAM50BQ9Y247 325 aa11.81□□□□□ -0.52
TTC28-207ENST00000490475 V9GY48 417 aaPredicted RBP11.81□□□□□ -0.52
TTC28-207ENST00000490475 GSTTP1A0A1W2PQM5 241 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 H3BNC9 293 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 ATP9AO75110 1047 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
TTC28-207ENST00000490475 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.52
TTC28-207ENST00000490475 EVCP57679 992 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 CCT2P78371 535 aaKnown RBP11.8□□□□□ -0.52
TTC28-207ENST00000490475 TFF2Q03403 129 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 UBE2SQ16763 222 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 CEP55Q53EZ4 464 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 TSHZ1Q6ZSZ6 1077 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 TMCO2Q7Z6W1 182 aaPredicted RBP11.8□□□□□ -0.52
TTC28-207ENST00000490475 NME8Q8N427 588 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 LMAN2LQ9H0V9 348 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 BCAS3Q9H6U6 928 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 KCNH7Q9NS40 1196 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 BARHL2Q9NY43 387 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 TCEAL9Q9UHQ7 104 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 MTUS1Q9ULD2 1270 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 MUC3AQ02505 3323 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 CNTNAP5Q8WYK1 1306 aa11.8□□□□□ -0.52
TTC28-207ENST00000490475 TTC3P53804 2025 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 NLRC5Q86WI3 1866 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 ZNF76P36508 570 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 SREBF1P36956 1147 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 STAT5BP51692 787 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 TCTN1Q2MV58 587 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 FAM160B1Q5W0V3 765 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 WWC2Q6AWC2 1192 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 C11orf84Q9BUA3 381 aaPredicted RBP11.79□□□□□ -0.52
TTC28-207ENST00000490475 ANO3Q9BYT9 981 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 NCOA5Q9HCD5 579 aaKnown RBP11.79□□□□□ -0.52
TTC28-207ENST00000490475 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
TTC28-207ENST00000490475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 ESYT2A0FGR8 921 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 C5orf67F2Z3F1 127 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 MEIS1O00470 390 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 UPP2O95045 317 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 CHRNA1P02708 482 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 GHRP10912 638 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 MARK3P27448 753 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 GNA11P29992 359 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 KCNQ1P51787 676 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 NEK4P51957 841 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 MRPS6P82932 125 aaKnown RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 SETQ01105 290 aaPredicted RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 AKAP17AQ02040 695 aaKnown RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 MGAT3Q09327 533 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 STK3Q13188 491 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms