RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
CDCP1-203ENST00000490471 MYO9BQ13459 2157 aa12.94□□□□□ -0.34
CDCP1-203ENST00000490471 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 RFXAPO00287 272 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 UPP2O95045 317 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 SEC24BO95487 1268 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 RB1P06400 928 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
CDCP1-203ENST00000490471 KCNA2P16389 499 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDCP1-203ENST00000490471 STAT5BP51692 787 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 GPNMBQ14956 572 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 GRIK4Q16099 956 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 UBE2SQ16763 222 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 TIGD5Q53EQ6 642 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 CEP55Q53EZ4 464 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 NIPA1Q7RTP0 329 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 PLPPR4Q7Z2D5 763 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
CDCP1-203ENST00000490471 FIBCD1Q8N539 461 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 CCDC148Q8NFR7 591 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 IL17RAQ96F46 866 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 KCNH7Q9NS40 1196 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 BARHL2Q9NY43 387 aa12.93□□□□□ -0.34
CDCP1-203ENST00000490471 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
CDCP1-203ENST00000490471 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
CDCP1-203ENST00000490471 ITGB5P18084 799 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 HTRA4P83105 476 aaPredicted RBP12.92□□□□□ -0.34
CDCP1-203ENST00000490471 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
CDCP1-203ENST00000490471 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
CDCP1-203ENST00000490471 MIS18BP1Q6P0N0 1132 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDCP1-203ENST00000490471 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 ANO3Q9BYT9 981 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 C22orf23Q9BZE7 217 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 SCUBE2Q9NQ36 999 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 TBC1D22BQ9NU19 505 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 PKD2L1Q9P0L9 805 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
CDCP1-203ENST00000490471 GSTTP1A0A1W2PQM5 241 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 hCG_1642624A0A1W2PR95 340 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 BACH1O14867 736 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 HBP1O60381 514 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 ATP9AO75110 1047 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 MARK3P27448 753 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 IGBP1P78318 339 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 ADAM17P78536 824 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 WWC2Q6AWC2 1192 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
CDCP1-203ENST00000490471 TSHZ1Q6ZSZ6 1077 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 SPOCK2Q92563 424 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 WNT8BQ93098 351 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
CDCP1-203ENST00000490471 LMAN2LQ9H0V9 348 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 CEP131Q9UPN4 1083 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 SZT2Q5T011 3432 aa12.91□□□□□ -0.34
CDCP1-203ENST00000490471 CNTNAP5Q8WYK1 1306 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 SCG2P13521 617 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 INSRRP14616 1297 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 SREBF1P36956 1147 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 ACTR2P61160 394 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 MRPS6P82932 125 aaKnown RBP12.9□□□□□ -0.34
CDCP1-203ENST00000490471 GPM6BQ13491 265 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 MBTPS1Q14703 1052 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 PFKFB3Q16875 520 aaPredicted RBP12.9□□□□□ -0.34
CDCP1-203ENST00000490471 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 PLA2G4DQ86XP0 818 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 TET1Q8NFU7 2136 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 DNAJB3Q8WWF6 145 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 C11orf84Q9BUA3 381 aaPredicted RBP12.9□□□□□ -0.34
CDCP1-203ENST00000490471 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 LRFN2Q9ULH4 789 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 PCDHA2Q9Y5H9 948 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 TRPV2Q9Y5S1 764 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 COL1A2P08123 1366 aa12.9□□□□□ -0.34
CDCP1-203ENST00000490471 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.35
CDCP1-203ENST00000490471 SMIM35A0A1B0GVV1 85 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 LCHNA4D1U4 455 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
CDCP1-203ENST00000490471 H3BNC9 293 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 STXBP3O00186 592 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 MEIS1O00470 390 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
CDCP1-203ENST00000490471 GHRP10912 638 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 BMP1P13497 986 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 HIC1Q14526 733 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms