RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 FBXL16Q8N461 479 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 CRYGNQ8WXF5 182 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 AGXT2Q9BYV1 514 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 JPH1Q9HDC5 661 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 SLC9A2Q9UBY0 812 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 MTUS1Q9ULD2 1270 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 NFASCO94856 1347 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 LOXHD1Q8IVV2 1947 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 NID2Q14112 1375 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 PKN1Q16512 942 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ADAMTS19Q8TE59 1207 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 GLG1Q92896 1179 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 JAKMIP1Q96N16 626 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 C17orf80Q9BSJ5 609 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 TSPYL2Q9H2G4 693 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 AGO4Q9HCK5 861 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 LMCD1Q9NZU5 365 aa22.18■■□□□ 1.14
TNFRSF1B-202ENST00000489921 NLRC5Q86WI3 1866 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 COL4A6Q14031 1691 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 TNFRSF10AO00220 468 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ATG7O95352 703 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 INSRRP14616 1297 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 METAP2P50579 478 aaKnown RBP eCLIP22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ACTR2P61160 394 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 AP3B2Q13367 1082 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 TAF2Q6P1X5 1199 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 DNAJB3Q8WWF6 145 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 BRF1Q92994 677 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 IFIH1Q9BYX4 1025 aaKnown RBP22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 TUBE1Q9UJT0 475 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 BRWD1Q9NSI6 2320 aa22.17■■□□□ 1.14
TNFRSF1B-202ENST00000489921 FAM86B1E9PN63 330 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 FAM86B2P0C5J1 330 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 SCG2P13521 617 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 KCNQ1P51787 676 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 LPIN1Q14693 890 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 PLCB4Q15147 1175 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 NTRK3Q16288 839 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 APBB2Q92870 758 aa22.16■■□□□ 1.14
TNFRSF1B-202ENST00000489921 IGLV3-22A0A075B6J6 115 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 IGKV6D-21A0A0A0MT36 114 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 DHX15O43143 795 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 CCNE2O96020 404 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 GHRP10912 638 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 RPS6KB1P23443 525 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 SKIV2LQ15477 1246 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 JAKMIP3Q5VZ66 844 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 NIPA1Q7RTP0 329 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 PLPPR4Q7Z2D5 763 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 CCDC136Q96JN2 1154 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ZMYND12Q9H0C1 365 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 GLT8D2Q9H1C3 349 aa22.15■■□□□ 1.14
TNFRSF1B-202ENST00000489921 PRPF3O43395 683 aaKnown RBP22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 UPP2O95045 317 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 CYP3A4P08684 503 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 IGBP1P78318 339 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 FBXO47Q5MNV8 452 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 BLOC1S2Q6QNY1 142 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 TRAPPC12Q8WVT3 735 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 NECAB3Q96P71 396 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 UHRF1Q96T88 793 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 SDF4Q9BRK5 362 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 NAP1L2Q9ULW6 460 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 COG5Q9UP83 839 aa22.14■■□□□ 1.13
TNFRSF1B-202ENST00000489921 RALGAPA2Q2PPJ7 1873 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 TTC3P53804 2025 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 CCDC196A0A1B0GTZ2 297 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 ESYT2A0FGR8 921 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 RRN3P2A6NIE6 340 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 LINC00271P0C7V0 271 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 STAT5BP51692 787 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 EVCP57679 992 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 FGD1P98174 961 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 ABHD15Q6UXT9 468 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 AGO3Q9H9G7 860 aaKnown RBP22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 CDY2AQ9Y6F7 541 aa22.13■■□□□ 1.13
TNFRSF1B-202ENST00000489921 ATG2AQ2TAZ0 1938 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 WDR81Q562E7 1941 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 ENPP3O14638 875 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 EDIL3O43854 480 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 EPC2Q52LR7 807 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 RSPH3Q86UC2 560 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 FBXO22Q8NEZ5 403 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 PHKBQ93100 1093 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 HLA-CQ95604 372 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 YME1L1Q96TA2 773 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 AZI2Q9H6S1 392 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 RC3H2Q9HBD1 1191 aaKnown RBP22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 PCDHA2Q9Y5H9 948 aa22.12■■□□□ 1.13
TNFRSF1B-202ENST00000489921 PPFIA3O75145 1194 aa22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 MRPS6P82932 125 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 AAK1Q2M2I8 961 aa22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 RTN4RL1Q86UN2 441 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 PLA2G4DQ86XP0 818 aa22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 CRIPAKQ8N1N5 446 aa22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 LINC01599Q8WXQ3 324 aa22.11■■□□□ 1.13
TNFRSF1B-202ENST00000489921 POTEB3A0JP26 581 aa22.1■■□□□ 1.13
TNFRSF1B-202ENST00000489921 DDX39AO00148 427 aaKnown RBP22.1■■□□□ 1.13
TNFRSF1B-202ENST00000489921 ATP4AP20648 1035 aa22.1■■□□□ 1.13
TNFRSF1B-202ENST00000489921 PDIA3P30101 505 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms