RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ASXL3Q9C0F0 2248 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 GOLIM4O00461 696 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 SPTLC1O15269 473 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 SORBS3O60504 671 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 FGF18O76093 207 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 EOMESO95936 686 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 CFHP08603 1231 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 SMIM10L2AP0DMW4 78 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 SMIM10L2BP0DMW5 78 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 ADD2P35612 726 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 MTHFRP42898 656 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 ITIH3Q06033 890 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 RING1Q06587 406 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 LPIN1Q14693 890 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 TTBK2Q6IQ55 1244 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 CES5AQ6NT32 575 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 C12orf76Q8N812 135 aaPredicted RBP8.59□□□□□ -1.03
COL9A1-209ENST00000489861 RANBP17Q9H2T7 1088 aaKnown RBP8.59□□□□□ -1.03
COL9A1-209ENST00000489861 KCNK12Q9HB15 430 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 TMEM260Q9NX78 707 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 SMG5Q9UPR3 1016 aaKnown RBP8.59□□□□□ -1.03
COL9A1-209ENST00000489861 USTQ9Y2C2 406 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 COL4A3Q01955 1670 aa8.59□□□□□ -1.03
COL9A1-209ENST00000489861 MYH6P13533 1939 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 LAMA5O15230 3695 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.58□□□□□ -1.04
COL9A1-209ENST00000489861 LRRN2O75325 713 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 HMMRO75330 724 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 PPFIA4O75335 1185 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 BCAR3O75815 825 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 SLC16A2P36021 539 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 HSDL1Q3SXM5 330 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 RARS2Q5T160 578 aaKnown RBP8.58□□□□□ -1.04
COL9A1-209ENST00000489861 NETO1Q8TDF5 533 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 SSH3Q8TE77 659 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 MPHOSPH6Q99547 160 aaKnown RBP8.58□□□□□ -1.04
COL9A1-209ENST00000489861 EPC1Q9H2F5 836 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 SETD4Q9NVD3 440 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
COL9A1-209ENST00000489861 WNT16Q9UBV4 365 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 DBR1Q9UK59 544 aaKnown RBP8.58□□□□□ -1.04
COL9A1-209ENST00000489861 CA14Q9ULX7 337 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 HCFC2Q9Y5Z7 792 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 PLIN4Q96Q06 1357 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 DOCK6Q96HP0 2047 aa8.58□□□□□ -1.04
COL9A1-209ENST00000489861 ADAMTS20P59510 1910 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 TAF4O00268 1085 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 GDF9O60383 454 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 ADAM17P78536 824 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 MGAT3Q09327 533 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 SPEM2Q0P670 501 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 ZNF528Q3MIS6 628 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
COL9A1-209ENST00000489861 KIAA1841Q6NSI8 718 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 MIER1Q8N108 512 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 KDF1Q8NAX2 398 aaPredicted RBP8.57□□□□□ -1.04
COL9A1-209ENST00000489861 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 RSAD2Q8WXG1 361 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 TBC1D5Q92609 795 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 CASP10Q92851 521 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 TAAR1Q96RJ0 339 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
COL9A1-209ENST00000489861 TCF25Q9BQ70 676 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 AGO3Q9H9G7 860 aaKnown RBP8.57□□□□□ -1.04
COL9A1-209ENST00000489861 COL20A1Q9P218 1284 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 LHX6Q9UPM6 363 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 NOP58Q9Y2X3 529 aaKnown RBP8.57□□□□□ -1.04
COL9A1-209ENST00000489861 SIT1Q9Y3P8 196 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 PCDHB12Q9Y5F1 795 aa8.57□□□□□ -1.04
COL9A1-209ENST00000489861 SRRM3A6NNA2 597 aaPredicted RBP8.56□□□□□ -1.04
COL9A1-209ENST00000489861 GSG1L2A8MUP6 293 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 B4DLN1 442 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 H3BRB1 525 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 LILRB5O75023 590 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 RFX1P22670 979 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
COL9A1-209ENST00000489861 FBXO47Q5MNV8 452 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 PHLDB3Q6NSJ2 640 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 UNQ6494/PRO21346Q6UXR6 183 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 AACSQ86V21 672 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 THNSL1Q8IYQ7 743 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
COL9A1-209ENST00000489861 COLGALT1Q8NBJ5 622 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 ZBTB44Q8NCP5 570 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 SECISBP2LQ93073 1101 aaKnown RBP8.56□□□□□ -1.04
COL9A1-209ENST00000489861 FOXQ1Q9C009 403 aa8.56□□□□□ -1.04
COL9A1-209ENST00000489861 PUS7LQ9H0K6 701 aaKnown RBP8.56□□□□□ -1.04
COL9A1-209ENST00000489861 TUT1Q9H6E5 874 aaKnown RBP8.56□□□□□ -1.04
COL9A1-209ENST00000489861 MTMR7Q9Y216 660 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms