RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 BAP1Q92560 729 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 WDR11Q9BZH6 1224 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
COL9A1-208ENST00000489611 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 JRKLQ9Y4A0 524 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 IGLV3-22A0A075B6J6 115 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 TACC1O75410 805 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 EPS15P42566 896 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 KIF11P52732 1056 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 SLC9C1Q4G0N8 1177 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 RRAGAQ7L523 313 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 EPM2AIP1Q7L775 607 aaPredicted RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 RNF10Q8N5U6 811 aaKnown RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 GJA10Q969M2 543 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 ALS2CR12Q96Q35 445 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 TMEM39BQ9GZU3 492 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 ARHGAP20Q9P2F6 1191 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 ASTN2O75129 1339 aaPredicted RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 LRRC53A6NM62 1247 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 RBAK-RBAKDNI3L0D1 243 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 SLC16A3O15427 465 aaKnown RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 PJA2O43164 708 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 AKR1B10O60218 316 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
COL9A1-208ENST00000489611 ASNSP08243 561 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 STAT3P40763 770 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 JAG1P78504 1218 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 MAP3K10Q02779 954 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 DMTNQ08495 405 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 PCDHA13Q9Y5I0 950 aa16.49■□□□□ 0.23
COL9A1-208ENST00000489611 EIF3DO15371 548 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL9A1-208ENST00000489611 ABL1P00519 1130 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 SERPING1P05155 500 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 ITIH3Q06033 890 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 RRP1BQ14684 758 aaKnown RBP16.48■□□□□ 0.23
COL9A1-208ENST00000489611 NFIL3Q16649 462 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 WDR93Q6P2C0 686 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 CCDC155Q8N6L0 562 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 NEK9Q8TD19 979 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 HSD17B14Q9BPX1 270 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 EIF2AK1Q9BQI3 630 aaKnown RBP16.48■□□□□ 0.23
COL9A1-208ENST00000489611 TYW1Q9NV66 732 aaKnown RBP16.48■□□□□ 0.23
COL9A1-208ENST00000489611 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 UBE4BO95155 1302 aa16.48■□□□□ 0.23
COL9A1-208ENST00000489611 CAP2P40123 477 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 GPS2Q13227 327 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 SFMBT2Q5VUG0 894 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 SLC5A5Q92911 643 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 REEP2Q9BRK0 252 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 ANKZF1Q9H8Y5 726 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 PLCB1Q9NQ66 1216 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 MAP3K20Q9NYL2 800 aaKnown RBP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 TSKSQ9UJT2 592 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 BZW2Q9Y6E2 419 aaKnown RBP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 TARSL2A2RTX5 802 aaKnown RBP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 PSMD10O75832 226 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 NR2F2P24468 414 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 ANXA13P27216 316 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 EIF4A3P38919 411 aaKnown RBP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 ECE1P42892 770 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 LRCH2Q5VUJ6 765 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 OTOP1Q7RTM1 612 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 RUBCNQ92622 972 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 LACRTQ9GZZ8 138 aa16.47■□□□□ 0.23
COL9A1-208ENST00000489611 ARMCX3Q9UH62 379 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-208ENST00000489611 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 CFBP00751 764 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 SNAP25P60880 206 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 ASTE1Q2TB18 679 aaPredicted RBP16.46■□□□□ 0.23
COL9A1-208ENST00000489611 CEP55Q53EZ4 464 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 NELFCDQ8IXH7 590 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 AIPL1Q9NZN9 384 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 TBC1D7Q9P0N9 293 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 TRIM10Q9UDY6 481 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 FBXL5Q9UKA1 691 aa16.46■□□□□ 0.23
COL9A1-208ENST00000489611 EPHB6O15197 1021 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 BCRP11274 1271 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 CCDC70Q6NSX1 233 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 NIPA1Q7RTP0 329 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 HDXQ7Z353 690 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms