RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 CNTD2Q9H8S5 307 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 EMC7Q9NPA0 242 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 TOMM22Q9NS69 142 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 APOBEC2Q9Y235 224 aaKnown RBP4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 SPO11Q9Y5K1 396 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 TEX51A0A1B0GUA7 166 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 ALG1L2C9J202 215 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 GPR39O43194 453 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 LRG1P02750 347 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 C4BPAP04003 597 aaKnown RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 GUCY2FP51841 1108 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 CACNB2Q08289 660 aaPredicted RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 DDB1Q16531 1140 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 HDGFL2Q7Z4V5 671 aaPredicted RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 SPATS2Q86XZ4 545 aaKnown RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 RPUSD2Q8IZ73 545 aaKnown RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 FAM26EQ8N5C1 309 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 CPA5Q8WXQ8 436 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 ERCC4Q92889 916 aaPredicted RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 RNF38Q9H0F5 515 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 HOMER2Q9NSB8 354 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 SLC5A4Q9NY91 659 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 ARHGAP28Q9P2N2 729 aa4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 MBD1Q9UIS9 605 aaPredicted RBP4.84□□□□□ -1.63
AC055855.1-201ENST00000489563 PHLDB1Q86UU1 1377 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 IRS2Q9Y4H2 1338 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 TGM5O43548 720 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 RAB11FIP3O75154 756 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 SEMA7AO75326 666 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 ULK1O75385 1050 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 MMEP08473 750 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 ENO2P09104 434 aaPredicted RBP4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 HMGB1P09429 215 aaKnown RBP4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 PTX3P26022 381 aaPredicted RBP4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 MC3RP41968 323 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 CDR1P51861 262 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 HERVK_113P62684 666 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 CR1LQ2VPA4 569 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 BROXQ5VW32 411 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 MCTP1Q6DN14 999 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 FERMT3Q86UX7 667 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 ZZZ3Q8IYH5 903 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 HIPK4Q8NE63 616 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 MZB1Q8WU39 189 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 SLC5A5Q92911 643 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 GBP4Q96PP9 640 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 PCDHA5Q9Y5H7 936 aa4.83□□□□□ -1.64
AC055855.1-201ENST00000489563 N4BP3O15049 544 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 CYP2C8P10632 490 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 HSP90B1P14625 803 aaKnown RBP4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 ATF2P15336 505 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 FBLN1P23142 703 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 SDHAP31040 664 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 LSP1P33241 339 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 SESN3P58005 492 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 DLG4P78352 724 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 DBPQ10586 325 aaPredicted RBP4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 CATSPEREQ5SY80 951 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 CD276Q5ZPR3 534 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 VASNQ6EMK4 673 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 TMC5Q6UXY8 1006 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 NME9Q86XW9 330 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 SMARCC2Q8TAQ2 1214 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 COG1Q8WTW3 980 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 DDX56Q9NY93 547 aaKnown RBP4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 HSPBP1Q9NZL4 362 aa4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 NOC2LQ9Y3T9 749 aaKnown RBP4.82□□□□□ -1.64
AC055855.1-201ENST00000489563 PRAMEF22A3QJZ6 481 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 RASSF10A6NK89 507 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 C8BP07358 591 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 TMEM253P0C7T8 217 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 CD40P25942 277 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 AOAHP28039 575 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 FNTBP49356 437 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 EPHB3P54753 998 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 SMAD3P84022 425 aaKnown RBP4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 FOXO4P98177 505 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 PFKPQ01813 784 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 ADCY1Q08828 1119 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 ITKQ08881 620 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 FAPQ12884 760 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 TERF2Q15554 542 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 SMAD2Q15796 467 aaKnown RBP4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 PRAMEF18Q5VWM3 479 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 SYDE1Q6ZW31 735 aaPredicted RBP4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 NECAB2Q7Z6G3 386 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 B3GNT8Q7Z7M8 397 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 STK32CQ86UX6 486 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 IGDCC3Q8IVU1 814 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 ZNF610Q8N9Z0 462 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 WDR48Q8TAF3 677 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 RTF1Q92541 710 aaKnown RBP4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 E2F7Q96AV8 911 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 PUS7LQ9H0K6 701 aaKnown RBP4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 PCDH18Q9HCL0 1135 aa4.81□□□□□ -1.64
AC055855.1-201ENST00000489563 SLC39A2Q9NP94 309 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms