RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 PGBD1Q96JS3 809 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 SDF4Q9BRK5 362 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 RNPEPQ9H4A4 650 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 ZNF576Q9H609 170 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 JPH1Q9HDC5 661 aaPredicted RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 TMEM260Q9NX78 707 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 TANC1Q9C0D5 1861 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 EMSYQ7Z589 1322 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 NRCAMQ92823 1304 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 FAM205CA6NFA0 338 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 BTBD18B2RXH4 712 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 MEIS1O00470 390 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 EDIL3O43854 480 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 F13A1P00488 732 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 CXCL10P02778 98 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 ZNF76P36508 570 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 PBX2P40425 430 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 ARHGAP4P98171 946 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 HIC1Q14526 733 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 ZNF618Q5T7W0 954 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 JAKMIP3Q5VZ66 844 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 CNKSR3Q6P9H4 555 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 FERMT3Q86UX7 667 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 DIS3L2Q8IYB7 885 aaKnown RBP11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 SLC9A7Q96T83 725 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 SMARCAD1Q9H4L7 1026 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 ERAP1Q9NZ08 941 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 SLC9A2Q9UBY0 812 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 PCDHA4Q9UN74 947 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 TELO2Q9Y4R8 837 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
SCAMP4-208ENST00000489554 GSTTP1A0A1W2PQM5 241 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 TREHO43280 583 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 EFCAB14O75071 495 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 CYP3A4P08684 503 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 THPOP40225 353 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 KCNJ6P48051 423 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 NUCB2P80303 420 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 GPNMBQ14956 572 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 TRAF7Q6Q0C0 670 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 CYP2W1Q8TAV3 490 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 CRYGNQ8WXF5 182 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 MYLIPQ8WY64 445 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 GLG1Q92896 1179 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 WNT8BQ93098 351 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 AZI2Q9H6S1 392 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 SLC28A3Q9HAS3 691 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 AGO4Q9HCK5 861 aaKnown RBP11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 SETD4Q9NVD3 440 aa11.96□□□□□ -0.49
SCAMP4-208ENST00000489554 ABHD14A-ACY1A0A1B0GW23 586 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 RSPH10B2B2RC85 870 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 H3BQV1 296 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 WNT7AO00755 349 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 NBNO60934 754 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 LGR5O75473 907 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 RSPH10BP0C881 870 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 ARP10275 920 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 PDIA4P13667 645 aaKnown RBP11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 FOSL2P15408 326 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 NLRP5P59047 1200 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 ADAM17P78536 824 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 SETQ01105 290 aaPredicted RBP11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 PPFIA1Q13136 1202 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 GRIN2CQ14957 1233 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 GALNT17Q6IS24 598 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 FAM173BQ6P4H8 233 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 PLA2G4DQ86XP0 818 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 BLIDQ8IZY5 108 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 NKX2-4Q9H2Z4 354 aa11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
SCAMP4-208ENST00000489554 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 IGLV3-22A0A075B6J6 115 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 FAM86B1E9PN63 330 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 RPLP2P05387 115 aaKnown RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 FAM86B2P0C5J1 330 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 XBP1P17861 261 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 PTMSP20962 102 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 MARK3P27448 753 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 KRT2P35908 639 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 SLC26A2P50443 739 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 RABGGTBP53611 331 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 ACTR2P61160 394 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 WDR5P61964 334 aaKnown RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 ITGB3BPQ13352 177 aaPredicted RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 TRIM29Q14134 588 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 IKBKEQ14164 716 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 MBTPS1Q14703 1052 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 TAF2Q6P1X5 1199 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms