RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 GLG1Q92896 1179 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 ZBTB10Q96DT7 871 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 IL17RAQ96F46 866 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 PCYT2Q99447 389 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 SMARCAD1Q9H4L7 1026 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 C11orf16Q9NQ32 467 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 CDY2AQ9Y6F7 541 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 PI4K2BG5E9Z4 385 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 H3BQ06 376 aaPredicted RBP14.2□□□□□ -0.14
CPSF3-204ENST00000489403 MAFGO15525 162 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 CTNNB1P35222 781 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 IGBP1P78318 339 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 TMEM31Q5JXX7 168 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 FBXO47Q5MNV8 452 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 TYW1BQ6NUM6 668 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 TSHZ1Q6ZSZ6 1077 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
CPSF3-204ENST00000489403 JPH1Q9HDC5 661 aaPredicted RBP14.2□□□□□ -0.14
CPSF3-204ENST00000489403 ANO2Q9NQ90 1003 aa14.2□□□□□ -0.14
CPSF3-204ENST00000489403 TTC3P53804 2025 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 FAM86C2PA6NEL3 165 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 GRXCR2A6NFK2 248 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 ENPP3O14638 875 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 GPR37L1O60883 481 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 INSRRP14616 1297 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 COL19A1Q14993 1142 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 APOA5Q6Q788 366 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 GJD3Q8N144 294 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 CYP2W1Q8TAV3 490 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 LINC01599Q8WXQ3 324 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 ZNF689Q96CS4 500 aaPredicted RBP14.19□□□□□ -0.14
CPSF3-204ENST00000489403 PABPC5Q96DU9 382 aaKnown RBP14.19□□□□□ -0.14
CPSF3-204ENST00000489403 FAM122AQ96E09 287 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 PGBD1Q96JS3 809 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 MXRA8Q9BRK3 442 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 AGO3Q9H9G7 860 aaKnown RBP14.19□□□□□ -0.14
CPSF3-204ENST00000489403 SLC9A2Q9UBY0 812 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 KIAA1671Q9BY89 1806 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 LOXHD1Q8IVV2 1947 aa14.19□□□□□ -0.14
CPSF3-204ENST00000489403 RRN3P2A6NIE6 340 aa14.18□□□□□ -0.14
CPSF3-204ENST00000489403 RB1P06400 928 aa14.18□□□□□ -0.14
CPSF3-204ENST00000489403 BMPR1AP36894 532 aa14.18□□□□□ -0.14
CPSF3-204ENST00000489403 NAPAP54920 295 aa14.18□□□□□ -0.14
CPSF3-204ENST00000489403 MRPS6P82932 125 aaKnown RBP14.18□□□□□ -0.14
CPSF3-204ENST00000489403 CLP1Q92989 425 aaKnown RBP14.18□□□□□ -0.14
CPSF3-204ENST00000489403 FAM49AQ9H0Q0 323 aaPredicted RBP14.18□□□□□ -0.14
CPSF3-204ENST00000489403 KCNH7Q9NS40 1196 aa14.18□□□□□ -0.14
CPSF3-204ENST00000489403 RBM28Q9NW13 759 aaKnown RBP14.18□□□□□ -0.14
CPSF3-204ENST00000489403 RWDD3Q9Y3V2 267 aa14.18□□□□□ -0.14
CPSF3-204ENST00000489403 NFASCO94856 1347 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 GRM6O15303 877 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 DGKIO75912 1065 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 RPLP2P05387 115 aaKnown RBP14.17□□□□□ -0.14
CPSF3-204ENST00000489403 ARP10275 920 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 CD52P31358 61 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 ACTR2P61160 394 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 FUT2Q10981 343 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 ITGB3BPQ13352 177 aaPredicted RBP14.17□□□□□ -0.14
CPSF3-204ENST00000489403 PLCB4Q15147 1175 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 PUS10Q3MIT2 529 aaKnown RBP14.17□□□□□ -0.14
CPSF3-204ENST00000489403 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 SYNE3Q6ZMZ3 975 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 EP400NLQ6ZTU2 488 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 TRAPPC12Q8WVT3 735 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 TCEANC2Q96MN5 208 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 C11orf84Q9BUA3 381 aaPredicted RBP14.17□□□□□ -0.14
CPSF3-204ENST00000489403 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 AZI2Q9H6S1 392 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 RIC8AQ9NPQ8 531 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 CLDND1Q9NY35 253 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 HCN4Q9Y3Q4 1203 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 TRPV2Q9Y5S1 764 aa14.17□□□□□ -0.14
CPSF3-204ENST00000489403 STXBP3O00186 592 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 SSTR3P32745 418 aaPredicted RBP14.16□□□□□ -0.14
CPSF3-204ENST00000489403 CLK2P49760 499 aaKnown RBP14.16□□□□□ -0.14
CPSF3-204ENST00000489403 ADCY7P51828 1080 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
CPSF3-204ENST00000489403 TMEM62Q0P6H9 643 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 BTG3Q14201 252 aaPredicted RBP14.16□□□□□ -0.14
CPSF3-204ENST00000489403 RTN1Q16799 776 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 CEP55Q53EZ4 464 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 IER5Q5VY09 327 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 PLPPR4Q7Z2D5 763 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 RTN4RL1Q86UN2 441 aaPredicted RBP14.16□□□□□ -0.14
CPSF3-204ENST00000489403 SKAP1Q86WV1 359 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 CRIPAKQ8N1N5 446 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 NEK1Q96PY6 1258 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 AGO4Q9HCK5 861 aaKnown RBP14.16□□□□□ -0.14
CPSF3-204ENST00000489403 PCDHA2Q9Y5H9 948 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 SQORQ9Y6N5 450 aa14.16□□□□□ -0.14
CPSF3-204ENST00000489403 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.14
CPSF3-204ENST00000489403 M0QZ92 97 aa14.15□□□□□ -0.14
CPSF3-204ENST00000489403 ZBTB43O43298 467 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms