RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 KIFAP3Q92845 792 aa23.19■■□□□ 1.3
NSMCE4A-211ENST00000489266 IFT43Q96FT9 208 aa23.19■■□□□ 1.3
NSMCE4A-211ENST00000489266 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.19■■□□□ 1.3
NSMCE4A-211ENST00000489266 BCL9O00512 1426 aa23.19■■□□□ 1.3
NSMCE4A-211ENST00000489266 KCNK3O14649 394 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 CALB2P22676 271 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 HLFQ16534 295 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 VWA3BQ502W6 1294 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 RNF220Q5VTB9 566 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 DDX47Q9H0S4 455 aaKnown RBP23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 PNMA3Q9UL41 463 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 TRIM33Q9UPN9 1127 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 V9GY48 417 aaPredicted RBP23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 ACADSP16219 412 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 PLEKHG4BQ96PX9 1271 aa23.18■■□□□ 1.3
NSMCE4A-211ENST00000489266 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 SUN1O94901 812 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 BAG3O95817 575 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 MCM7P33993 719 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 POLE2P56282 527 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 OR52E8Q6IFG1 317 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 TRAPPC9Q96Q05 1148 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 AP1M1Q9BXS5 423 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 LUC7LQ9NQ29 371 aaKnown RBP23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 KBTBD4Q9NVX7 518 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 ATP8A1Q9Y2Q0 1164 aa23.17■■□□□ 1.3
NSMCE4A-211ENST00000489266 GSG1L2A8MUP6 293 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 NUDT17P0C025 328 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 PHKG2P15735 406 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 PEX5P50542 639 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 RAD23BP54727 409 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 RPS6KA1Q15418 735 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 TDRD12Q587J7 1177 aaKnown RBP23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 CCDC84Q86UT8 332 aaPredicted RBP23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 CTNNAL1Q9UBT7 734 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 CCNB1P14635 433 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 RFC5P40937 340 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 PPP1R2P41236 205 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 DIXDC1Q155Q3 683 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 C4orf32Q8N8J7 132 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 VCXQ9H320 206 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 FAM114A2Q9NRY5 505 aa23.16■■□□□ 1.3
NSMCE4A-211ENST00000489266 hCG_1642624A0A1W2PR95 340 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 CCDC188H7C350 402 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 O00370 1275 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 CEP104O60308 925 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 IFNAR2P48551 515 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 SEC23AQ15436 765 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 MAIP1Q8WWC4 291 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 RAB3IPQ96QF0 476 aaPredicted RBP23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 ORAI2Q96SN7 254 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 UBE2OQ9C0C9 1292 aaKnown RBP23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 EPB41L4BQ9H329 900 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 RXFP1Q9HBX9 757 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 DLGAP2Q9P1A6 1054 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 SLC4A4Q9Y6R1 1079 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 SKIV2L2P42285 1042 aaKnown RBP23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 MTA1Q13330 715 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 STK32AQ8WU08 396 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 EDEM3Q9BZQ6 932 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 SLITRK6Q9H5Y7 841 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 AMACRQ9UHK6 382 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 PCDHGA4Q9Y5G9 962 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 MYH4Q9Y623 1939 aa23.15■■□□□ 1.3
NSMCE4A-211ENST00000489266 PGRMC1O00264 195 aaKnown RBP23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 PEX11AO75192 247 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 MBD4O95243 580 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 GJB6O95452 261 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 GCP02774 474 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 TPBGLP0DKB5 382 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 PIK3AP1Q6ZUJ8 805 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 FITM2Q8N6M3 262 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 TBC1D16Q8TBP0 767 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 ANKS1AQ92625 1134 aa23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 UTP4Q969X6 686 aaKnown RBP23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 RNF41Q9H4P4 317 aaPredicted RBP23.14■■□□□ 1.3
NSMCE4A-211ENST00000489266 CCDC169A6NNP5 214 aa23.14■■□□□ 1.29
NSMCE4A-211ENST00000489266 IFI35P80217 286 aaPredicted RBP23.14■■□□□ 1.29
NSMCE4A-211ENST00000489266 FGD4Q96M96 766 aa23.14■■□□□ 1.29
NSMCE4A-211ENST00000489266 MMTAG2Q9BU76 263 aaKnown RBP23.14■■□□□ 1.29
NSMCE4A-211ENST00000489266 NUP188Q5SRE5 1749 aa23.14■■□□□ 1.29
NSMCE4A-211ENST00000489266 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 USP11P51784 963 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 KCTD19Q17RG1 926 aaPredicted RBP23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 SLC9C1Q4G0N8 1177 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 FMO2Q99518 471 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 TRIM7Q9C029 511 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 AZI2Q9H6S1 392 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 CYP39A1Q9NYL5 469 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 NOC2LQ9Y3T9 749 aaKnown RBP23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 RIC1Q4ADV7 1423 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 RGS16O15492 202 aaPredicted RBP23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 TTI1O43156 1089 aa23.13■■□□□ 1.29
NSMCE4A-211ENST00000489266 CREB3O43889 395 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms